Analysis of interatomic Contacts of Structural Units in PDB entry:
8Y3Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8Y3Z entry

There are 4 chains in PDB entry 8Y3Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 7ASP 277
B
 SER 7ASP 277
C
 T -7 G 23
D
 C 80 A 110
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 8Y3Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 22Right-handed alpha
Helix 2
AA2
A
33 42Right-handed alpha
Helix 3
AA3
A
44 58Right-handed alpha
Helix 4
AA4
A
73 78Right-handed alpha
Helix 5
AA5
A
81 90Right-handed alpha
Helix 6
AA6
A
93 120Right-handed alpha
Helix 7
AA7
A
120 141Right-handed alpha
Helix 8
AA8
A
143 150Right-handed alpha
Helix 9
AA9
A
153 161Right-handed alpha
Helix 10
AB1
A
168 194Right-handed alpha
Helix 11
AB2
A
198 208Right-handed alpha
Helix 12
AB3
A
208 220Right-handed alpha
Helix 13
AB4
A
222 243Right-handed alpha
Helix 14
AB5
A
247 267Right-handed alpha
Helix 15
AB6
A
268 270Right-handed 310
Helix 16
AB7
B
8 22Right-handed alpha
Helix 17
AB8
B
33 42Right-handed alpha
Helix 18
AB9
B
44 58Right-handed alpha
Helix 19
AC1
B
73 78Right-handed alpha
Helix 20
AC2
B
81 90Right-handed alpha
Helix 21
AC3
B
93 120Right-handed alpha
Helix 22
AC4
B
120 141Right-handed alpha
Helix 23
AC5
B
143 150Right-handed alpha
Helix 24
AC6
B
153 159Right-handed alpha
Helix 25
AC7
B
168 194Right-handed alpha
Helix 26
AC8
B
198 208Right-handed alpha
Helix 27
AC9
B
208 220Right-handed alpha
Helix 28
AD1
B
222 243Right-handed alpha
Helix 29
AD2
B
247 267Right-handed alpha
Helix 30
AD3
B
268 270Right-handed 310
Helix 31
AD4
B
271 276Right-handed 310
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There are 2 sheets in PDB entry 8Y3Z. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 64first strand
Strand 2
A
67 71anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
61 64first strand
Strand 2
B
67 71anti-parallel
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