Analysis of interatomic Contacts of Structural Units in PDB entry:
8Y56


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8Y56 entry

There is 1 chain in PDB entry 8Y56 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
R
 PRO 35ARG 724
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 8Y56. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
R
38 40Right-handed 310
Helix 2
AA2
R
41 62Right-handed alpha
Helix 3
AA3
R
66 80Right-handed alpha
Helix 4
AA4
R
80 92Right-handed alpha
Helix 5
AA5
R
94 98Right-handed 310
Helix 6
AA6
R
99 124Right-handed alpha
Helix 7
AA7
R
126 128Right-handed 310
Helix 8
AA8
R
129 143Right-handed alpha
Helix 9
AA9
R
149 158Right-handed alpha
Helix 10
AB1
R
164 196Right-handed alpha
Helix 11
AB2
R
197 201Right-handed 310
Helix 12
AB3
R
202 217Right-handed alpha
Helix 13
AB4
R
217 233Right-handed alpha
Helix 14
AB5
R
238 250Right-handed alpha
Helix 15
AB6
R
251 264Right-handed alpha
Helix 16
AB7
R
272 288Right-handed alpha
Helix 17
AB8
R
288 302Right-handed alpha
Helix 18
AB9
R
306 322Right-handed alpha
Helix 19
AC1
R
326 337Right-handed alpha
Helix 20
AC2
R
339 367Right-handed alpha
Helix 21
AC3
R
368 370Right-handed 310
Helix 22
AC4
R
371 404Right-handed alpha
Helix 23
AC5
R
405 408Right-handed 310
Helix 24
AC6
R
409 436Right-handed alpha
Helix 25
AC7
R
439 474Right-handed alpha
Helix 26
AC8
R
480 502Right-handed alpha
Helix 27
AC9
R
517 546Right-handed alpha
Helix 28
AD1
R
654 682Right-handed alpha
Helix 29
AD2
R
688 711Right-handed alpha
Helix 30
AD3
R
719 724Right-handed alpha
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There are no sheets in PDB entry 8Y56
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