Analysis of interatomic Contacts of Structural Units in PDB entry:
8Y6N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8Y6N entry

There are 2 chains in PDB entry 8Y6N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TRP 29TRP 551
B
 TRP 29TRP 551
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 8Y6N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 36Right-handed alpha
Helix 2
AA2
A
38 46Right-handed alpha
Helix 3
AA3
A
60 73Right-handed alpha
Helix 4
AA4
A
86 101Right-handed alpha
Helix 5
AA5
A
102 115Right-handed alpha
Helix 6
AA6
A
208 234Right-handed alpha
Helix 7
AA7
A
236 244Right-handed alpha
Helix 8
AA8
A
247 261Right-handed alpha
Helix 9
AA9
A
272 276Right-handed 310
Helix 10
AB1
A
279 283Right-handed 310
Helix 11
AB2
A
285 293Right-handed alpha
Helix 12
AB3
A
295 308Right-handed alpha
Helix 13
AB4
A
345 361Right-handed alpha
Helix 14
AB5
A
373 382Right-handed alpha
Helix 15
AB6
A
384 388Right-handed 310
Helix 16
AB7
A
403 409Right-handed alpha
Helix 17
AB8
A
451 468Right-handed alpha
Helix 18
AB9
A
479 492Right-handed alpha
Helix 19
AC1
A
524 528Right-handed 310
Helix 20
AC2
A
531 538Right-handed alpha
Helix 21
AC3
A
540 544Right-handed 310
Helix 22
AC4
B
31 36Right-handed alpha
Helix 23
AC5
B
38 46Right-handed alpha
Helix 24
AC6
B
60 73Right-handed alpha
Helix 25
AC7
B
86 101Right-handed alpha
Helix 26
AC8
B
102 115Right-handed alpha
Helix 27
AC9
B
208 234Right-handed alpha
Helix 28
AD1
B
236 244Right-handed alpha
Helix 29
AD2
B
247 261Right-handed alpha
Helix 30
AD3
B
272 276Right-handed 310
Helix 31
AD4
B
279 283Right-handed 310
Helix 32
AD5
B
285 293Right-handed alpha
Helix 33
AD6
B
295 308Right-handed alpha
Helix 34
AD7
B
345 361Right-handed alpha
Helix 35
AD8
B
373 382Right-handed alpha
Helix 36
AD9
B
384 388Right-handed 310
Helix 37
AE1
B
403 409Right-handed alpha
Helix 38
AE2
B
451 468Right-handed alpha
Helix 39
AE3
B
479 492Right-handed alpha
Helix 40
AE4
B
524 528Right-handed 310
Helix 41
AE5
B
531 538Right-handed alpha
Helix 42
AE6
B
540 544Right-handed 310
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There are no sheets in PDB entry 8Y6N
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