Analysis of interatomic Contacts of Structural Units in PDB entry:
8YEZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8YEZ entry

There are 3 chains in PDB entry 8YEZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 570GLU 2521
B
 GLU 570GLU 2521
C
 GLU 570GLU 2521
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are172 helices in PDB entry 8YEZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
570 577Right-handed alpha
Helix 2
AA2
A
580 593Right-handed alpha
Helix 3
AA3
A
598 618Right-handed alpha
Helix 4
AA4
A
618 625Right-handed alpha
Helix 5
AA5
A
626 644Right-handed alpha
Helix 6
AA6
A
679 701Right-handed alpha
Helix 7
AA7
A
701 709Right-handed alpha
Helix 8
AA8
A
790 813Right-handed alpha
Helix 9
AA9
A
814 829Right-handed alpha
Helix 10
AB1
A
834 841Right-handed alpha
Helix 11
AB2
A
850 871Right-handed alpha
Helix 12
AB3
A
924 929Right-handed alpha
Helix 13
AB4
A
930 956Right-handed alpha
Helix 14
AB5
A
971 976Right-handed alpha
Helix 15
AB6
A
978 989Right-handed alpha
Helix 16
AB7
A
995 1010Right-handed alpha
Helix 17
AB8
A
1015 1026Right-handed alpha
Helix 18
AB9
A
1030 1055Right-handed alpha
Helix 19
AC1
A
1099 1116Right-handed alpha
Helix 20
AC2
A
1155 1164Right-handed alpha
Helix 21
AC3
A
1166 1179Right-handed alpha
Helix 22
AC4
A
1183 1199Right-handed alpha
Helix 23
AC5
A
1199 1204Right-handed alpha
Helix 24
AC6
A
1207 1232Right-handed alpha
Helix 25
AC7
A
1285 1302Right-handed alpha
Helix 26
AC8
A
1306 1320Right-handed alpha
Helix 27
AC9
A
1320 1370Right-handed alpha
Helix 28
AD1
A
1408 1412Right-handed 310
Helix 29
AD2
A
1514 1533Right-handed alpha
Helix 30
AD3
A
1533 1557Right-handed alpha
Helix 31
AD4
A
1561 1568Right-handed alpha
Helix 32
AD5
A
1646 1652Right-handed alpha
Helix 33
AD6
A
1656 1668Right-handed alpha
Helix 34
AD7
A
1670 1686Right-handed alpha
Helix 35
AD8
A
1687 1702Right-handed alpha
Helix 36
AD9
A
1708 1718Right-handed alpha
Helix 37
AE1
A
1726 1747Right-handed alpha
Helix 38
AE2
A
1784 1803Right-handed alpha
Helix 39
AE3
A
1941 1951Right-handed alpha
Helix 40
AE4
A
1960 1978Right-handed alpha
Helix 41
AE5
A
2002 2024Right-handed alpha
Helix 42
AE6
A
2026 2045Right-handed alpha
Helix 43
AE7
A
2061 2084Right-handed alpha
Helix 44
AE8
A
2100 2112Right-handed alpha
Helix 45
AE9
A
2114 2127Right-handed alpha
Helix 46
AF1
A
2133 2159Right-handed alpha
Helix 47
AF2
A
2168 2185Right-handed alpha
Helix 48
AF3
A
2187 2198Right-handed alpha
Helix 49
AF4
A
2236 2248Right-handed alpha
Helix 50
AF5
A
2250 2258Right-handed alpha
Helix 51
AF6
A
2281 2295Right-handed alpha
Helix 52
AF7
A
2311 2314Right-handed 310
Helix 53
AF8
A
2332 2342Right-handed alpha
Helix 54
AF9
A
2377 2382Right-handed 310
Helix 55
AG1
A
2437 2460Right-handed alpha
Helix 56
AG2
A
2475 2490Right-handed alpha
Helix 57
AG3
A
2493 2505Right-handed alpha
Helix 58
AG4
A
2512 2517Right-handed alpha
Helix 59
AG5
B
571 577Right-handed alpha
Helix 60
AG6
B
580 593Right-handed alpha
Helix 61
AG7
B
598 618Right-handed alpha
Helix 62
AG8
B
618 644Right-handed alpha
Helix 63
AG9
B
679 701Right-handed alpha
Helix 64
AH1
B
701 709Right-handed alpha
Helix 65
AH2
B
790 813Right-handed alpha
Helix 66
AH3
B
814 829Right-handed alpha
Helix 67
AH4
B
834 841Right-handed alpha
Helix 68
AH5
B
850 871Right-handed alpha
Helix 69
AH6
B
924 929Right-handed alpha
Helix 70
AH7
B
930 956Right-handed alpha
Helix 71
AH8
B
971 976Right-handed alpha
Helix 72
AH9
B
978 989Right-handed alpha
Helix 73
AI1
B
995 1010Right-handed alpha
Helix 74
AI2
B
1015 1026Right-handed alpha
Helix 75
AI3
B
1030 1055Right-handed alpha
Helix 76
AI4
B
1099 1116Right-handed alpha
Helix 77
AI5
B
1155 1164Right-handed alpha
Helix 78
AI6
B
1166 1179Right-handed alpha
Helix 79
AI7
B
1183 1199Right-handed alpha
Helix 80
AI8
B
1199 1204Right-handed alpha
Helix 81
AI9
B
1207 1232Right-handed alpha
Helix 82
AJ1
B
1285 1302Right-handed alpha
Helix 83
AJ2
B
1306 1320Right-handed alpha
Helix 84
AJ3
B
1320 1370Right-handed alpha
Helix 85
AJ4
B
1408 1412Right-handed 310
Helix 86
AJ5
B
1514 1533Right-handed alpha
Helix 87
AJ6
B
1533 1557Right-handed alpha
Helix 88
AJ7
B
1561 1568Right-handed alpha
Helix 89
AJ8
B
1646 1652Right-handed alpha
Helix 90
AJ9
B
1656 1668Right-handed alpha
Helix 91
AK1
B
1670 1686Right-handed alpha
Helix 92
AK2
B
1687 1702Right-handed alpha
Helix 93
AK3
B
1708 1718Right-handed alpha
Helix 94
AK4
B
1726 1747Right-handed alpha
Helix 95
AK5
B
1784 1803Right-handed alpha
Helix 96
AK6
B
1941 1951Right-handed alpha
Helix 97
AK7
B
1960 1978Right-handed alpha
Helix 98
AK8
B
2002 2024Right-handed alpha
Helix 99
AK9
B
2026 2045Right-handed alpha
Helix 100
AL1
B
2061 2084Right-handed alpha
Helix 101
AL2
B
2100 2112Right-handed alpha
Helix 102
AL3
B
2114 2127Right-handed alpha
Helix 103
AL4
B
2133 2159Right-handed alpha
Helix 104
AL5
B
2168 2185Right-handed alpha
Helix 105
AL6
B
2187 2198Right-handed alpha
Helix 106
AL7
B
2236 2248Right-handed alpha
Helix 107
AL8
B
2250 2258Right-handed alpha
Helix 108
AL9
B
2281 2295Right-handed alpha
Helix 109
AM1
B
2311 2314Right-handed 310
Helix 110
AM2
B
2332 2342Right-handed alpha
Helix 111
AM3
B
2377 2382Right-handed 310
Helix 112
AM4
B
2437 2460Right-handed alpha
Helix 113
AM5
B
2475 2490Right-handed alpha
Helix 114
AM6
B
2493 2505Right-handed alpha
Helix 115
AM7
B
2512 2517Right-handed alpha
Helix 116
AM8
C
571 577Right-handed alpha
Helix 117
AM9
C
580 593Right-handed alpha
Helix 118
AN1
C
598 618Right-handed alpha
Helix 119
AN2
C
618 644Right-handed alpha
Helix 120
AN3
C
679 701Right-handed alpha
Helix 121
AN4
C
701 709Right-handed alpha
Helix 122
AN5
C
790 813Right-handed alpha
Helix 123
AN6
C
814 829Right-handed alpha
Helix 124
AN7
C
834 841Right-handed alpha
Helix 125
AN8
C
850 871Right-handed alpha
Helix 126
AN9
C
924 929Right-handed alpha
Helix 127
AO1
C
930 956Right-handed alpha
Helix 128
AO2
C
971 976Right-handed alpha
Helix 129
AO3
C
978 989Right-handed alpha
Helix 130
AO4
C
995 1010Right-handed alpha
Helix 131
AO5
C
1015 1026Right-handed alpha
Helix 132
AO6
C
1030 1055Right-handed alpha
Helix 133
AO7
C
1100 1116Right-handed alpha
Helix 134
AO8
C
1155 1164Right-handed alpha
Helix 135
AO9
C
1166 1179Right-handed alpha
Helix 136
AP1
C
1183 1199Right-handed alpha
Helix 137
AP2
C
1199 1204Right-handed alpha
Helix 138
AP3
C
1207 1232Right-handed alpha
Helix 139
AP4
C
1285 1302Right-handed alpha
Helix 140
AP5
C
1306 1320Right-handed alpha
Helix 141
AP6
C
1320 1370Right-handed alpha
Helix 142
AP7
C
1408 1412Right-handed 310
Helix 143
AP8
C
1514 1533Right-handed alpha
Helix 144
AP9
C
1533 1557Right-handed alpha
Helix 145
AQ1
C
1561 1568Right-handed alpha
Helix 146
AQ2
C
1646 1652Right-handed alpha
Helix 147
AQ3
C
1656 1668Right-handed alpha
Helix 148
AQ4
C
1670 1686Right-handed alpha
Helix 149
AQ5
C
1687 1702Right-handed alpha
Helix 150
AQ6
C
1708 1718Right-handed alpha
Helix 151
AQ7
C
1726 1747Right-handed alpha
Helix 152
AQ8
C
1784 1803Right-handed alpha
Helix 153
AQ9
C
1941 1951Right-handed alpha
Helix 154
AR1
C
1960 1978Right-handed alpha
Helix 155
AR2
C
2002 2024Right-handed alpha
Helix 156
AR3
C
2026 2045Right-handed alpha
Helix 157
AR4
C
2061 2084Right-handed alpha
Helix 158
AR5
C
2100 2112Right-handed alpha
Helix 159
AR6
C
2114 2127Right-handed alpha
Helix 160
AR7
C
2133 2159Right-handed alpha
Helix 161
AR8
C
2168 2185Right-handed alpha
Helix 162
AR9
C
2187 2198Right-handed alpha
Helix 163
AS1
C
2236 2248Right-handed alpha
Helix 164
AS2
C
2250 2258Right-handed alpha
Helix 165
AS3
C
2281 2295Right-handed alpha
Helix 166
AS4
C
2311 2314Right-handed 310
Helix 167
AS5
C
2332 2342Right-handed alpha
Helix 168
AS6
C
2377 2382Right-handed 310
Helix 169
AS7
C
2437 2460Right-handed alpha
Helix 170
AS8
C
2475 2490Right-handed alpha
Helix 171
AS9
C
2493 2505Right-handed alpha
Helix 172
AT1
C
2512 2517Right-handed alpha
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There are 9 sheets in PDB entry 8YEZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2223 2228first strand
Strand 2
A
2207 2216anti-parallel
Strand 3
A
2299 2309anti-parallel
Strand 4
A
2319 2328anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2232 2234first strand
Strand 2
A
2265 2271anti-parallel
Strand 3
A
2417 2424anti-parallel
Strand 4
A
2359 2362parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2350 2356first strand
Strand 2
A
2383 2392anti-parallel
Strand 3
A
2401 2408anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2223 2228first strand
Strand 2
B
2207 2216anti-parallel
Strand 3
B
2299 2309anti-parallel
Strand 4
B
2319 2328anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2232 2234first strand
Strand 2
B
2265 2271anti-parallel
Strand 3
B
2417 2424anti-parallel
Strand 4
B
2359 2362parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2350 2356first strand
Strand 2
B
2383 2392anti-parallel
Strand 3
B
2401 2408anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2223 2228first strand
Strand 2
C
2207 2216anti-parallel
Strand 3
C
2299 2309anti-parallel
Strand 4
C
2319 2328anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2232 2234first strand
Strand 2
C
2265 2271anti-parallel
Strand 3
C
2417 2424anti-parallel
Strand 4
C
2359 2362parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2350 2356first strand
Strand 2
C
2383 2392anti-parallel
Strand 3
C
2401 2408anti-parallel
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