Analysis of interatomic Contacts of Structural Units in PDB entry:
8YFU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8YFU entry

There are 2 chains in PDB entry 8YFU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 21CYS 620
B
 LYS 26CYS 620
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 8YFU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 36Right-handed alpha
Helix 2
AA2
A
43 100Right-handed alpha
Helix 3
AA3
A
119 168Right-handed alpha
Helix 4
AA4
A
170 180Right-handed alpha
Helix 5
AA5
A
183 188Right-handed alpha
Helix 6
AA6
A
189 206Right-handed alpha
Helix 7
AA7
A
210 218Right-handed alpha
Helix 8
AA8
A
230 258Right-handed alpha
Helix 9
AA9
A
265 296Right-handed alpha
Helix 10
AB1
A
300 304Right-handed 310
Helix 11
AB2
A
312 337Right-handed alpha
Helix 12
AB3
A
345 360Right-handed alpha
Helix 13
AB4
A
367 383Right-handed alpha
Helix 14
AB5
A
390 402Right-handed alpha
Helix 15
AB6
A
403 419Right-handed alpha
Helix 16
AB7
A
446 471Right-handed alpha
Helix 17
AB8
A
476 501Right-handed alpha
Helix 18
AB9
A
506 532Right-handed alpha
Helix 19
AC1
A
556 571Right-handed alpha
Helix 20
AC2
A
571 581Right-handed alpha
Helix 21
AC3
A
587 616Right-handed alpha
Helix 22
AC4
B
27 36Right-handed alpha
Helix 23
AC5
B
43 100Right-handed alpha
Helix 24
AC6
B
119 168Right-handed alpha
Helix 25
AC7
B
170 179Right-handed alpha
Helix 26
AC8
B
183 188Right-handed alpha
Helix 27
AC9
B
189 206Right-handed alpha
Helix 28
AD1
B
210 218Right-handed alpha
Helix 29
AD2
B
230 258Right-handed alpha
Helix 30
AD3
B
265 296Right-handed alpha
Helix 31
AD4
B
298 303Right-handed alpha
Helix 32
AD5
B
312 337Right-handed alpha
Helix 33
AD6
B
343 345Right-handed 310
Helix 34
AD7
B
346 360Right-handed alpha
Helix 35
AD8
B
367 384Right-handed alpha
Helix 36
AD9
B
390 403Right-handed alpha
Helix 37
AE1
B
404 420Right-handed alpha
Helix 38
AE2
B
448 471Right-handed alpha
Helix 39
AE3
B
473 501Right-handed alpha
Helix 40
AE4
B
506 532Right-handed alpha
Helix 41
AE5
B
555 571Right-handed alpha
Helix 42
AE6
B
573 580Right-handed alpha
Helix 43
AE7
B
588 620Right-handed alpha
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There are no sheets in PDB entry 8YFU
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