Analysis of interatomic Contacts of Structural Units in PDB entry:
8YKR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8YKR entry

There are 6 chains in PDB entry 8YKR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ALA 2ASN 170
A
 ALA 2ASN 170
C
 SER 3ASN 170
D
 ALA 2ASN 170
E
 ALA 2ASN 170
F
 TYR 9ASN 170
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 8YKR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
10 38Right-handed alpha
Helix 2
AA2
B
45 73Right-handed alpha
Helix 3
AA3
B
92 121Right-handed alpha
Helix 4
AA4
B
123 133Right-handed alpha
Helix 5
AA5
B
134 155Right-handed alpha
Helix 6
AA6
B
159 170Right-handed alpha
Helix 7
AA7
A
10 38Right-handed alpha
Helix 8
AA8
A
45 73Right-handed alpha
Helix 9
AA9
A
92 120Right-handed alpha
Helix 10
AB1
A
123 139Right-handed alpha
Helix 11
AB2
A
140 156Right-handed alpha
Helix 12
AB3
A
158 168Right-handed alpha
Helix 13
AB4
C
10 38Right-handed alpha
Helix 14
AB5
C
45 74Right-handed alpha
Helix 15
AB6
C
92 120Right-handed alpha
Helix 16
AB7
C
123 135Right-handed alpha
Helix 17
AB8
C
137 156Right-handed alpha
Helix 18
AB9
C
159 170Right-handed alpha
Helix 19
AC1
D
10 38Right-handed alpha
Helix 20
AC2
D
45 73Right-handed alpha
Helix 21
AC3
D
92 118Right-handed alpha
Helix 22
AC4
D
123 134Right-handed alpha
Helix 23
AC5
D
137 155Right-handed alpha
Helix 24
AC6
D
159 170Right-handed alpha
Helix 25
AC7
E
10 38Right-handed alpha
Helix 26
AC8
E
45 73Right-handed alpha
Helix 27
AC9
E
92 120Right-handed alpha
Helix 28
AD1
E
123 137Right-handed alpha
Helix 29
AD2
E
137 156Right-handed alpha
Helix 30
AD3
E
159 170Right-handed alpha
Helix 31
AD4
F
10 38Right-handed alpha
Helix 32
AD5
F
45 73Right-handed alpha
Helix 33
AD6
F
92 121Right-handed alpha
Helix 34
AD7
F
123 135Right-handed alpha
Helix 35
AD8
F
135 155Right-handed alpha
Helix 36
AD9
F
159 170Right-handed alpha
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There are no sheets in PDB entry 8YKR
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