Analysis of interatomic Contacts of Structural Units in PDB entry:
8YXA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8YXA entry

There are 2 chains in PDB entry 8YXA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 3ALA 581
B
 HIS 3GLY 584
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 71 helices in PDB entry 8YXA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 15Right-handed alpha
Helix 2
AA2
A
15 31Right-handed alpha
Helix 3
AA3
A
35 56Right-handed alpha
Helix 4
AA4
A
65 75Right-handed alpha
Helix 5
AA5
A
76 78Right-handed 310
Helix 6
AA6
A
79 85Right-handed alpha
Helix 7
AA7
A
85 90Right-handed alpha
Helix 8
AA8
A
94 105Right-handed alpha
Helix 9
AA9
A
119 130Right-handed alpha
Helix 10
AB1
A
130 146Right-handed alpha
Helix 11
AB2
A
150 168Right-handed alpha
Helix 12
AB3
A
169 171Right-handed 310
Helix 13
AB4
A
173 176Right-handed 310
Helix 14
AB5
A
177 206Right-handed alpha
Helix 15
AB6
A
206 223Right-handed alpha
Helix 16
AB7
A
227 246Right-handed alpha
Helix 17
AB8
A
249 267Right-handed alpha
Helix 18
AB9
A
268 271Right-handed 310
Helix 19
AC1
A
273 277Right-handed 310
Helix 20
AC2
A
282 292Right-handed alpha
Helix 21
AC3
A
314 322Right-handed alpha
Helix 22
AC4
A
322 338Right-handed alpha
Helix 23
AC5
A
342 361Right-handed alpha
Helix 24
AC6
A
365 370Right-handed alpha
Helix 25
AC7
A
371 373Right-handed 310
Helix 26
AC8
A
376 398Right-handed alpha
Helix 27
AC9
A
399 415Right-handed alpha
Helix 28
AD1
A
419 438Right-handed alpha
Helix 29
AD2
A
441 467Right-handed alpha
Helix 30
AD3
A
470 478Right-handed alpha
Helix 31
AD4
A
483 490Right-handed alpha
Helix 32
AD5
A
503 508Right-handed alpha
Helix 33
AD6
A
511 516Right-handed alpha
Helix 34
AD7
A
517 536Right-handed alpha
Helix 35
AD8
A
540 558Right-handed alpha
Helix 36
AD9
A
569 579Right-handed alpha
Helix 37
AE1
B
5 15Right-handed alpha
Helix 38
AE2
B
15 31Right-handed alpha
Helix 39
AE3
B
35 56Right-handed alpha
Helix 40
AE4
B
65 75Right-handed alpha
Helix 41
AE5
B
79 84Right-handed alpha
Helix 42
AE6
B
85 90Right-handed alpha
Helix 43
AE7
B
91 93Right-handed 310
Helix 44
AE8
B
94 105Right-handed alpha
Helix 45
AE9
B
119 130Right-handed alpha
Helix 46
AF1
B
130 146Right-handed alpha
Helix 47
AF2
B
150 169Right-handed alpha
Helix 48
AF3
B
173 206Right-handed alpha
Helix 49
AF4
B
207 223Right-handed alpha
Helix 50
AF5
B
227 246Right-handed alpha
Helix 51
AF6
B
249 267Right-handed alpha
Helix 52
AF7
B
268 271Right-handed 310
Helix 53
AF8
B
275 281Right-handed alpha
Helix 54
AF9
B
282 284Right-handed 310
Helix 55
AG1
B
285 292Right-handed alpha
Helix 56
AG2
B
305 310Right-handed alpha
Helix 57
AG3
B
314 322Right-handed alpha
Helix 58
AG4
B
322 338Right-handed alpha
Helix 59
AG5
B
342 361Right-handed alpha
Helix 60
AG6
B
365 370Right-handed alpha
Helix 61
AG7
B
376 398Right-handed alpha
Helix 62
AG8
B
399 415Right-handed alpha
Helix 63
AG9
B
419 438Right-handed alpha
Helix 64
AH1
B
444 467Right-handed alpha
Helix 65
AH2
B
470 478Right-handed alpha
Helix 66
AH3
B
483 490Right-handed alpha
Helix 67
AH4
B
503 508Right-handed alpha
Helix 68
AH5
B
510 515Right-handed 310
Helix 69
AH6
B
517 536Right-handed alpha
Helix 70
AH7
B
540 559Right-handed alpha
Helix 71
AH8
B
565 583Right-handed alpha
Back to top of page
There are no sheets in PDB entry 8YXA
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il