Analysis of interatomic Contacts of Structural Units in PDB entry:
8YXK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8YXK entry

There are 2 chains in PDB entry 8YXK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 359LYS 509
B
 SER 359LYS 509
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 8YXK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
359 373Right-handed alpha
Helix 2
AA2
A
374 378Right-handed 310
Helix 3
AA3
A
380 391Right-handed alpha
Helix 4
AA4
A
394 407Right-handed alpha
Helix 5
AA5
A
411 418Right-handed alpha
Helix 6
AA6
A
430 446Right-handed alpha
Helix 7
AA7
A
453 462Right-handed alpha
Helix 8
AA8
A
467 471Right-handed 310
Helix 9
AA9
A
472 486Right-handed alpha
Helix 10
AB1
A
490 494Right-handed 310
Helix 11
AB2
A
500 509Right-handed alpha
Helix 12
AB3
B
360 373Right-handed alpha
Helix 13
AB4
B
374 378Right-handed 310
Helix 14
AB5
B
380 392Right-handed alpha
Helix 15
AB6
B
394 407Right-handed alpha
Helix 16
AB7
B
411 418Right-handed alpha
Helix 17
AB8
B
430 446Right-handed alpha
Helix 18
AB9
B
453 462Right-handed alpha
Helix 19
AC1
B
463 471Right-handed 310
Helix 20
AC2
B
472 486Right-handed alpha
Helix 21
AC3
B
490 494Right-handed 310
Helix 22
AC4
B
500 509Right-handed alpha
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There are no sheets in PDB entry 8YXK
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