Analysis of interatomic Contacts of Structural Units in PDB entry:
8YXS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8YXS entry

There are 10 chains in PDB entry 8YXS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 11ALA 388
A
 MET 390ALA 456
B
 VAL 11ALA 388
B
 MET 390ALA 456
C
 VAL 11ALA 388
C
 MET 390ALA 456
D
 VAL 11ALA 388
D
 MET 390ALA 456
E
 VAL 11ALA 388
E
 MET 390ALA 456
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are137 helices in PDB entry 8YXS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 50Right-handed alpha
Helix 2
AA2
A
63 74Right-handed alpha
Helix 3
AA3
A
77 90Right-handed alpha
Helix 4
AA4
A
99 106Right-handed alpha
Helix 5
AA5
A
108 116Right-handed alpha
Helix 6
AA6
A
118 120Right-handed 310
Helix 7
AA7
A
121 137Right-handed alpha
Helix 8
AA8
A
137 146Right-handed alpha
Helix 9
AA9
A
150 161Right-handed alpha
Helix 10
AB1
A
161 166Right-handed alpha
Helix 11
AB2
A
166 177Right-handed alpha
Helix 12
AB3
A
179 192Right-handed alpha
Helix 13
AB4
A
198 212Right-handed alpha
Helix 14
AB5
A
220 231Right-handed alpha
Helix 15
AB6
A
231 236Right-handed alpha
Helix 16
AB7
A
242 247Right-handed 310
Helix 17
AB8
A
250 255Right-handed alpha
Helix 18
AB9
A
255 265Right-handed alpha
Helix 19
AC1
A
271 292Right-handed alpha
Helix 20
AC2
A
305 322Right-handed alpha
Helix 21
AC3
A
326 348Right-handed alpha
Helix 22
AC4
A
355 360Right-handed alpha
Helix 23
AC5
A
363 367Right-handed 310
Helix 24
AC6
A
370 381Right-handed alpha
Helix 25
AC7
A
385 406Right-handed alpha
Helix 26
AC8
A
417 429Right-handed alpha
Helix 27
AC9
A
445 451Right-handed alpha
Helix 28
AD1
B
33 51Right-handed alpha
Helix 29
AD2
B
63 73Right-handed alpha
Helix 30
AD3
B
77 89Right-handed alpha
Helix 31
AD4
B
99 106Right-handed alpha
Helix 32
AD5
B
108 115Right-handed alpha
Helix 33
AD6
B
118 120Right-handed 310
Helix 34
AD7
B
121 137Right-handed alpha
Helix 35
AD8
B
137 146Right-handed alpha
Helix 36
AD9
B
150 160Right-handed alpha
Helix 37
AE1
B
161 177Right-handed alpha
Helix 38
AE2
B
179 192Right-handed alpha
Helix 39
AE3
B
198 212Right-handed alpha
Helix 40
AE4
B
220 231Right-handed alpha
Helix 41
AE5
B
231 236Right-handed alpha
Helix 42
AE6
B
242 247Right-handed 310
Helix 43
AE7
B
250 255Right-handed alpha
Helix 44
AE8
B
255 265Right-handed alpha
Helix 45
AE9
B
271 293Right-handed alpha
Helix 46
AF1
B
305 320Right-handed alpha
Helix 47
AF2
B
326 348Right-handed alpha
Helix 48
AF3
B
355 360Right-handed alpha
Helix 49
AF4
B
363 367Right-handed 310
Helix 50
AF5
B
370 381Right-handed alpha
Helix 51
AF6
B
385 400Right-handed alpha
Helix 52
AF7
B
401 406Right-handed alpha
Helix 53
AF8
B
417 429Right-handed alpha
Helix 54
AF9
B
446 451Right-handed alpha
Helix 55
AG1
C
12 16Right-handed 310
Helix 56
AG2
C
33 50Right-handed alpha
Helix 57
AG3
C
63 74Right-handed alpha
Helix 58
AG4
C
77 88Right-handed alpha
Helix 59
AG5
C
99 106Right-handed alpha
Helix 60
AG6
C
108 116Right-handed alpha
Helix 61
AG7
C
118 120Right-handed 310
Helix 62
AG8
C
121 137Right-handed alpha
Helix 63
AG9
C
137 146Right-handed alpha
Helix 64
AH1
C
152 160Right-handed alpha
Helix 65
AH2
C
161 177Right-handed alpha
Helix 66
AH3
C
179 192Right-handed alpha
Helix 67
AH4
C
197 212Right-handed alpha
Helix 68
AH5
C
220 231Right-handed alpha
Helix 69
AH6
C
231 237Right-handed alpha
Helix 70
AH7
C
250 255Right-handed alpha
Helix 71
AH8
C
255 265Right-handed alpha
Helix 72
AH9
C
271 293Right-handed alpha
Helix 73
AI1
C
305 311Right-handed alpha
Helix 74
AI2
C
312 320Right-handed alpha
Helix 75
AI3
C
326 349Right-handed alpha
Helix 76
AI4
C
355 360Right-handed alpha
Helix 77
AI5
C
363 367Right-handed 310
Helix 78
AI6
C
370 381Right-handed alpha
Helix 79
AI7
C
385 406Right-handed alpha
Helix 80
AI8
C
417 429Right-handed alpha
Helix 81
AI9
C
446 451Right-handed alpha
Helix 82
AJ1
D
33 50Right-handed alpha
Helix 83
AJ2
D
63 74Right-handed alpha
Helix 84
AJ3
D
77 89Right-handed alpha
Helix 85
AJ4
D
99 106Right-handed alpha
Helix 86
AJ5
D
108 116Right-handed alpha
Helix 87
AJ6
D
118 120Right-handed 310
Helix 88
AJ7
D
121 137Right-handed alpha
Helix 89
AJ8
D
137 146Right-handed alpha
Helix 90
AJ9
D
150 161Right-handed alpha
Helix 91
AK1
D
161 178Right-handed alpha
Helix 92
AK2
D
179 192Right-handed alpha
Helix 93
AK3
D
198 212Right-handed alpha
Helix 94
AK4
D
220 231Right-handed alpha
Helix 95
AK5
D
231 236Right-handed alpha
Helix 96
AK6
D
242 246Right-handed 310
Helix 97
AK7
D
250 255Right-handed alpha
Helix 98
AK8
D
255 264Right-handed alpha
Helix 99
AK9
D
271 292Right-handed alpha
Helix 100
AL1
D
305 312Right-handed alpha
Helix 101
AL2
D
312 320Right-handed alpha
Helix 102
AL3
D
326 349Right-handed alpha
Helix 103
AL4
D
355 360Right-handed alpha
Helix 104
AL5
D
363 367Right-handed 310
Helix 105
AL6
D
370 379Right-handed alpha
Helix 106
AL7
D
385 401Right-handed alpha
Helix 107
AL8
D
401 406Right-handed alpha
Helix 108
AL9
D
417 431Right-handed alpha
Helix 109
AM1
D
434 438Right-handed 310
Helix 110
AM2
D
446 451Right-handed alpha
Helix 111
AM3
E
33 50Right-handed alpha
Helix 112
AM4
E
62 74Right-handed alpha
Helix 113
AM5
E
77 90Right-handed alpha
Helix 114
AM6
E
99 106Right-handed alpha
Helix 115
AM7
E
108 116Right-handed alpha
Helix 116
AM8
E
118 120Right-handed 310
Helix 117
AM9
E
121 137Right-handed alpha
Helix 118
AN1
E
137 146Right-handed alpha
Helix 119
AN2
E
152 157Right-handed alpha
Helix 120
AN3
E
161 177Right-handed alpha
Helix 121
AN4
E
179 192Right-handed alpha
Helix 122
AN5
E
198 212Right-handed alpha
Helix 123
AN6
E
220 231Right-handed alpha
Helix 124
AN7
E
231 236Right-handed alpha
Helix 125
AN8
E
239 246Right-handed 310
Helix 126
AN9
E
255 264Right-handed alpha
Helix 127
AO1
E
271 293Right-handed alpha
Helix 128
AO2
E
305 312Right-handed alpha
Helix 129
AO3
E
312 320Right-handed alpha
Helix 130
AO4
E
326 349Right-handed alpha
Helix 131
AO5
E
355 360Right-handed alpha
Helix 132
AO6
E
363 367Right-handed 310
Helix 133
AO7
E
370 381Right-handed alpha
Helix 134
AO8
E
386 406Right-handed alpha
Helix 135
AO9
E
417 429Right-handed alpha
Helix 136
AP1
E
434 439Right-handed alpha
Helix 137
AP2
E
445 451Right-handed alpha
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There are no sheets in PDB entry 8YXS
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