Analysis of interatomic Contacts of Structural Units in PDB entry:
8YZU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8YZU entry

There are 4 chains in PDB entry 8YZU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 7PHE 312
B
 GLU 7PHE 312
C
 GLU 7PHE 312
D
 GLU 7PHE 312
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 84 helices in PDB entry 8YZU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 12Right-handed 310
Helix 2
AA2
A
14 29Right-handed alpha
Helix 3
AA3
A
41 53Right-handed alpha
Helix 4
AA4
A
56 71Right-handed alpha
Helix 5
AA5
A
72 77Right-handed 310
Helix 6
AA6
A
81 102Right-handed alpha
Helix 7
AA7
A
103 110Right-handed 310
Helix 8
AA8
A
111 118Right-handed alpha
Helix 9
AA9
A
124 135Right-handed alpha
Helix 10
AB1
A
136 140Right-handed 310
Helix 11
AB2
A
142 163Right-handed alpha
Helix 12
AB3
A
164 167Right-handed 310
Helix 13
AB4
A
176 187Right-handed alpha
Helix 14
AB5
A
187 196Right-handed alpha
Helix 15
AB6
A
202 211Right-handed alpha
Helix 16
AB7
A
213 234Right-handed alpha
Helix 17
AB8
A
242 252Right-handed alpha
Helix 18
AB9
A
254 277Right-handed alpha
Helix 19
AC1
A
280 301Right-handed alpha
Helix 20
AC2
A
301 306Right-handed alpha
Helix 21
AC3
A
307 310Right-handed 310
Helix 22
AC4
B
8 12Right-handed 310
Helix 23
AC5
B
14 29Right-handed alpha
Helix 24
AC6
B
41 53Right-handed alpha
Helix 25
AC7
B
56 71Right-handed alpha
Helix 26
AC8
B
72 77Right-handed 310
Helix 27
AC9
B
81 102Right-handed alpha
Helix 28
AD1
B
103 106Right-handed 310
Helix 29
AD2
B
111 119Right-handed alpha
Helix 30
AD3
B
124 136Right-handed alpha
Helix 31
AD4
B
137 140Right-handed 310
Helix 32
AD5
B
142 163Right-handed alpha
Helix 33
AD6
B
164 167Right-handed 310
Helix 34
AD7
B
176 187Right-handed alpha
Helix 35
AD8
B
187 196Right-handed alpha
Helix 36
AD9
B
202 229Right-handed alpha
Helix 37
AE1
B
229 234Right-handed alpha
Helix 38
AE2
B
242 252Right-handed alpha
Helix 39
AE3
B
254 278Right-handed alpha
Helix 40
AE4
B
280 301Right-handed alpha
Helix 41
AE5
B
301 306Right-handed alpha
Helix 42
AE6
B
307 310Right-handed 310
Helix 43
AE7
C
8 12Right-handed 310
Helix 44
AE8
C
14 29Right-handed alpha
Helix 45
AE9
C
41 53Right-handed alpha
Helix 46
AF1
C
56 71Right-handed alpha
Helix 47
AF2
C
72 77Right-handed 310
Helix 48
AF3
C
81 102Right-handed alpha
Helix 49
AF4
C
103 110Right-handed 310
Helix 50
AF5
C
111 118Right-handed alpha
Helix 51
AF6
C
124 136Right-handed alpha
Helix 52
AF7
C
137 140Right-handed 310
Helix 53
AF8
C
142 163Right-handed alpha
Helix 54
AF9
C
164 167Right-handed 310
Helix 55
AG1
C
176 187Right-handed alpha
Helix 56
AG2
C
187 196Right-handed alpha
Helix 57
AG3
C
202 211Right-handed alpha
Helix 58
AG4
C
213 234Right-handed alpha
Helix 59
AG5
C
242 252Right-handed alpha
Helix 60
AG6
C
254 278Right-handed alpha
Helix 61
AG7
C
280 301Right-handed alpha
Helix 62
AG8
C
301 306Right-handed alpha
Helix 63
AG9
C
307 310Right-handed 310
Helix 64
AH1
D
8 12Right-handed 310
Helix 65
AH2
D
14 29Right-handed alpha
Helix 66
AH3
D
41 53Right-handed alpha
Helix 67
AH4
D
56 71Right-handed alpha
Helix 68
AH5
D
72 77Right-handed 310
Helix 69
AH6
D
81 102Right-handed alpha
Helix 70
AH7
D
103 106Right-handed 310
Helix 71
AH8
D
111 119Right-handed alpha
Helix 72
AH9
D
124 136Right-handed alpha
Helix 73
AI1
D
137 140Right-handed 310
Helix 74
AI2
D
142 163Right-handed alpha
Helix 75
AI3
D
164 167Right-handed 310
Helix 76
AI4
D
176 187Right-handed alpha
Helix 77
AI5
D
187 196Right-handed alpha
Helix 78
AI6
D
202 211Right-handed alpha
Helix 79
AI7
D
213 234Right-handed alpha
Helix 80
AI8
D
242 252Right-handed alpha
Helix 81
AI9
D
254 277Right-handed alpha
Helix 82
AJ1
D
280 301Right-handed alpha
Helix 83
AJ2
D
301 306Right-handed alpha
Helix 84
AJ3
D
307 310Right-handed 310
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There are no sheets in PDB entry 8YZU
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