Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z0A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8Z0A entry

There are 8 chains in PDB entry 8Z0A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TRP 18PRO 625
B
 TRP 18PRO 625
C
 TRP 18PRO 625
D
 TRP 18PRO 625
E
 PRO 469LEU 500
F
 PRO 469LEU 500
G
 PRO 469LEU 500
H
 PRO 469LEU 500
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are112 helices in PDB entry 8Z0A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 59Right-handed alpha
Helix 2
AA2
A
69 76Right-handed alpha
Helix 3
AA3
A
84 97Right-handed alpha
Helix 4
AA4
A
119 124Right-handed 310
Helix 5
AA5
A
125 137Right-handed alpha
Helix 6
AA6
A
145 169Right-handed alpha
Helix 7
AA7
A
181 193Right-handed alpha
Helix 8
AA8
A
207 216Right-handed alpha
Helix 9
AA9
A
228 237Right-handed alpha
Helix 10
AB1
A
238 252Right-handed alpha
Helix 11
AB2
A
259 270Right-handed alpha
Helix 12
AB3
A
294 312Right-handed alpha
Helix 13
AB4
A
319 321Right-handed 310
Helix 14
AB5
A
338 356Right-handed alpha
Helix 15
AB6
A
376 411Right-handed alpha
Helix 16
AB7
A
421 436Right-handed alpha
Helix 17
AB8
A
454 464Right-handed alpha
Helix 18
AB9
A
492 499Right-handed alpha
Helix 19
AC1
A
513 522Right-handed alpha
Helix 20
AC2
A
532 542Right-handed alpha
Helix 21
AC3
A
544 548Right-handed 310
Helix 22
AC4
A
559 577Right-handed alpha
Helix 23
AC5
A
578 593Right-handed alpha
Helix 24
AC6
A
594 596Right-handed 310
Helix 25
AC7
A
597 617Right-handed alpha
Helix 26
AC8
B
42 59Right-handed alpha
Helix 27
AC9
B
69 76Right-handed alpha
Helix 28
AD1
B
84 97Right-handed alpha
Helix 29
AD2
B
119 124Right-handed 310
Helix 30
AD3
B
125 137Right-handed alpha
Helix 31
AD4
B
145 169Right-handed alpha
Helix 32
AD5
B
181 193Right-handed alpha
Helix 33
AD6
B
207 216Right-handed alpha
Helix 34
AD7
B
228 237Right-handed alpha
Helix 35
AD8
B
238 252Right-handed alpha
Helix 36
AD9
B
259 270Right-handed alpha
Helix 37
AE1
B
294 312Right-handed alpha
Helix 38
AE2
B
319 321Right-handed 310
Helix 39
AE3
B
338 356Right-handed alpha
Helix 40
AE4
B
376 411Right-handed alpha
Helix 41
AE5
B
421 436Right-handed alpha
Helix 42
AE6
B
454 464Right-handed alpha
Helix 43
AE7
B
492 499Right-handed alpha
Helix 44
AE8
B
513 522Right-handed alpha
Helix 45
AE9
B
532 542Right-handed alpha
Helix 46
AF1
B
544 548Right-handed 310
Helix 47
AF2
B
559 577Right-handed alpha
Helix 48
AF3
B
578 593Right-handed alpha
Helix 49
AF4
B
594 596Right-handed 310
Helix 50
AF5
B
597 617Right-handed alpha
Helix 51
AF6
C
42 59Right-handed alpha
Helix 52
AF7
C
69 76Right-handed alpha
Helix 53
AF8
C
84 97Right-handed alpha
Helix 54
AF9
C
119 124Right-handed 310
Helix 55
AG1
C
125 138Right-handed alpha
Helix 56
AG2
C
145 169Right-handed alpha
Helix 57
AG3
C
181 193Right-handed alpha
Helix 58
AG4
C
207 216Right-handed alpha
Helix 59
AG5
C
228 237Right-handed alpha
Helix 60
AG6
C
238 252Right-handed alpha
Helix 61
AG7
C
259 270Right-handed alpha
Helix 62
AG8
C
293 312Right-handed alpha
Helix 63
AG9
C
319 321Right-handed 310
Helix 64
AH1
C
338 356Right-handed alpha
Helix 65
AH2
C
376 411Right-handed alpha
Helix 66
AH3
C
421 436Right-handed alpha
Helix 67
AH4
C
454 464Right-handed alpha
Helix 68
AH5
C
492 499Right-handed alpha
Helix 69
AH6
C
513 522Right-handed alpha
Helix 70
AH7
C
532 542Right-handed alpha
Helix 71
AH8
C
544 548Right-handed 310
Helix 72
AH9
C
559 577Right-handed alpha
Helix 73
AI1
C
578 593Right-handed alpha
Helix 74
AI2
C
594 596Right-handed 310
Helix 75
AI3
C
597 617Right-handed alpha
Helix 76
AI4
D
42 59Right-handed alpha
Helix 77
AI5
D
69 76Right-handed alpha
Helix 78
AI6
D
84 97Right-handed alpha
Helix 79
AI7
D
119 124Right-handed 310
Helix 80
AI8
D
125 138Right-handed alpha
Helix 81
AI9
D
145 169Right-handed alpha
Helix 82
AJ1
D
181 193Right-handed alpha
Helix 83
AJ2
D
207 216Right-handed alpha
Helix 84
AJ3
D
228 237Right-handed alpha
Helix 85
AJ4
D
238 252Right-handed alpha
Helix 86
AJ5
D
259 270Right-handed alpha
Helix 87
AJ6
D
293 312Right-handed alpha
Helix 88
AJ7
D
319 321Right-handed 310
Helix 89
AJ8
D
338 356Right-handed alpha
Helix 90
AJ9
D
376 411Right-handed alpha
Helix 91
AK1
D
421 436Right-handed alpha
Helix 92
AK2
D
454 464Right-handed alpha
Helix 93
AK3
D
492 499Right-handed alpha
Helix 94
AK4
D
513 522Right-handed alpha
Helix 95
AK5
D
532 542Right-handed alpha
Helix 96
AK6
D
544 548Right-handed 310
Helix 97
AK7
D
559 577Right-handed alpha
Helix 98
AK8
D
578 593Right-handed alpha
Helix 99
AK9
D
594 596Right-handed 310
Helix 100
AL1
D
597 617Right-handed alpha
Helix 101
AL2
E
470 477Right-handed alpha
Helix 102
AL3
E
478 480Right-handed 310
Helix 103
AL4
E
488 499Right-handed alpha
Helix 104
AL5
F
470 477Right-handed alpha
Helix 105
AL6
F
478 480Right-handed 310
Helix 106
AL7
F
488 499Right-handed alpha
Helix 107
AL8
G
470 477Right-handed alpha
Helix 108
AL9
G
478 480Right-handed 310
Helix 109
AM1
G
488 499Right-handed alpha
Helix 110
AM2
H
470 477Right-handed alpha
Helix 111
AM3
H
478 480Right-handed 310
Helix 112
AM4
H
488 499Right-handed alpha
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There are 12 sheets in PDB entry 8Z0A. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 79first strand
Strand 2
A
101 106anti-parallel
Strand 3
A
113 117anti-parallel
Strand 4
A
62 67parallel
Strand 5
A
28 32parallel
Strand 6
A
175 180parallel
Strand 7
A
198 204parallel
Strand 8
A
254 257parallel
Strand 9
A
276 277parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
473 478first strand
Strand 2
A
361 367parallel
Strand 3
A
323 329parallel
Strand 4
A
502 504parallel
Strand 5
A
526 529parallel
Strand 6
A
550 553parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
372 375first strand
Strand 2
A
446 448anti-parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
77 79first strand
Strand 2
B
101 106anti-parallel
Strand 3
B
113 117anti-parallel
Strand 4
B
62 67parallel
Strand 5
B
28 32parallel
Strand 6
B
175 180parallel
Strand 7
B
198 204parallel
Strand 8
B
254 257parallel
Strand 9
B
276 277parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
473 478first strand
Strand 2
B
361 367parallel
Strand 3
B
323 329parallel
Strand 4
B
502 504parallel
Strand 5
B
526 529parallel
Strand 6
B
550 553parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
372 375first strand
Strand 2
B
446 448anti-parallel
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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
77 79first strand
Strand 2
C
101 106anti-parallel
Strand 3
C
113 117anti-parallel
Strand 4
C
62 67parallel
Strand 5
C
28 32parallel
Strand 6
C
175 180parallel
Strand 7
C
198 204parallel
Strand 8
C
254 257parallel
Strand 9
C
276 277parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
473 478first strand
Strand 2
C
361 367parallel
Strand 3
C
323 329parallel
Strand 4
C
502 504parallel
Strand 5
C
526 529parallel
Strand 6
C
550 553parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
372 375first strand
Strand 2
C
446 448anti-parallel
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There are 9 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
77 79first strand
Strand 2
D
101 106anti-parallel
Strand 3
D
113 117anti-parallel
Strand 4
D
62 67parallel
Strand 5
D
28 32parallel
Strand 6
D
175 180parallel
Strand 7
D
198 204parallel
Strand 8
D
254 257parallel
Strand 9
D
276 277parallel
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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
473 478first strand
Strand 2
D
361 367parallel
Strand 3
D
323 329parallel
Strand 4
D
502 504parallel
Strand 5
D
526 529parallel
Strand 6
D
550 553parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
372 375first strand
Strand 2
D
446 448anti-parallel
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