Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z0F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8Z0F entry

There are 2 chains in PDB entry 8Z0F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 56GLN 649
B
 ARG 56GLN 649
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 8Z0F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
60 72Right-handed alpha
Helix 2
AA2
A
73 75Right-handed 310
Helix 3
AA3
A
84 92Right-handed alpha
Helix 4
AA4
A
96 115Right-handed alpha
Helix 5
AA5
A
118 125Right-handed alpha
Helix 6
AA6
A
126 167Right-handed alpha
Helix 7
AA7
A
170 178Right-handed alpha
Helix 8
AA8
A
184 189Right-handed alpha
Helix 9
AA9
A
191 203Right-handed alpha
Helix 10
AB1
A
211 219Right-handed alpha
Helix 11
AB2
A
236 242Right-handed alpha
Helix 12
AB3
A
249 275Right-handed alpha
Helix 13
AB4
A
275 283Right-handed alpha
Helix 14
AB5
A
284 318Right-handed alpha
Helix 15
AB6
A
323 334Right-handed alpha
Helix 16
AB7
A
355 359Right-handed 310
Helix 17
AB8
A
361 378Right-handed alpha
Helix 18
AB9
A
378 395Right-handed alpha
Helix 19
AC1
A
396 401Right-handed 310
Helix 20
AC2
A
479 487Right-handed alpha
Helix 21
AC3
A
518 524Right-handed alpha
Helix 22
AC4
A
529 534Right-handed alpha
Helix 23
AC5
A
543 549Right-handed alpha
Helix 24
AC6
A
573 577Right-handed 310
Helix 25
AC7
A
580 582Right-handed 310
Helix 26
AC8
A
583 588Right-handed alpha
Helix 27
AC9
A
605 616Right-handed alpha
Helix 28
AD1
B
60 72Right-handed alpha
Helix 29
AD2
B
83 89Right-handed alpha
Helix 30
AD3
B
93 109Right-handed alpha
Helix 31
AD4
B
122 167Right-handed alpha
Helix 32
AD5
B
170 175Right-handed alpha
Helix 33
AD6
B
184 189Right-handed alpha
Helix 34
AD7
B
191 203Right-handed alpha
Helix 35
AD8
B
213 221Right-handed alpha
Helix 36
AD9
B
236 243Right-handed alpha
Helix 37
AE1
B
248 275Right-handed alpha
Helix 38
AE2
B
277 283Right-handed alpha
Helix 39
AE3
B
284 318Right-handed alpha
Helix 40
AE4
B
323 334Right-handed alpha
Helix 41
AE5
B
356 361Right-handed alpha
Helix 42
AE6
B
361 378Right-handed alpha
Helix 43
AE7
B
378 395Right-handed alpha
Helix 44
AE8
B
396 401Right-handed 310
Helix 45
AE9
B
479 487Right-handed alpha
Helix 46
AF1
B
518 524Right-handed alpha
Helix 47
AF2
B
529 534Right-handed alpha
Helix 48
AF3
B
543 549Right-handed alpha
Helix 49
AF4
B
573 577Right-handed 310
Helix 50
AF5
B
580 582Right-handed 310
Helix 51
AF6
B
583 588Right-handed alpha
Helix 52
AF7
B
605 614Right-handed alpha
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There are 7 sheets in PDB entry 8Z0F. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
432 435first strand
Strand 2
A
496 499parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
447 448first strand
Strand 2
A
454 456anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
469 471first strand
Strand 2
A
619 623parallel
Strand 3
A
591 595parallel
Strand 4
A
505 508parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
434 436first strand
Strand 2
B
496 500parallel
Strand 3
B
440 443anti-parallel
Strand 4
B
461 463anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
447 448first strand
Strand 2
B
454 456anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
469 471first strand
Strand 2
B
619 623parallel
Strand 3
B
591 595parallel
Strand 4
B
505 508parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
638 639first strand
Strand 2
B
645 646anti-parallel
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