Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z0L

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8Z0L entry

There are 12 chains in PDB entry 8Z0L (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 11	LYS 335
B	THR 11	GLN 333
C	THR 11	GLN 333
D	THR 11	GLN 333
E	MET 0	ILE 254
F	PRO 15	LYS 340
G	THR 11	GLN 333
H	THR 11	GLN 333
I	A -14	C 17
J	G 0	A 6
L	U 21	G 80
M	MET 1	LEU 175

There are 74 helices in PDB entry 8Z0L. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	36	40	Right-handed 310
Helix 2	AA2	A	63	68	Right-handed alpha
Helix 3	AA3	A	111	128	Right-handed alpha
Helix 4	AA4	A	131	144	Right-handed alpha
Helix 5	AA5	A	175	177	Right-handed 310
Helix 6	AA6	A	186	201	Right-handed alpha
Helix 7	AA7	A	250	259	Right-handed alpha
Helix 8	AA8	A	296	305	Right-handed alpha
Helix 9	AA9	A	312	326	Right-handed alpha
Helix 10	AB1	B	63	71	Right-handed alpha
Helix 11	AB2	B	111	129	Right-handed alpha
Helix 12	AB3	B	131	145	Right-handed alpha
Helix 13	AB4	B	186	202	Right-handed alpha
Helix 14	AB5	B	250	259	Right-handed alpha
Helix 15	AB6	B	296	302	Right-handed alpha
Helix 16	AB7	B	312	326	Right-handed alpha
Helix 17	AB8	C	36	40	Right-handed 310
Helix 18	AB9	C	63	71	Right-handed alpha
Helix 19	AC1	C	111	129	Right-handed alpha
Helix 20	AC2	C	131	144	Right-handed alpha
Helix 21	AC3	C	186	202	Right-handed alpha
Helix 22	AC4	C	250	255	Right-handed alpha
Helix 23	AC5	C	296	305	Right-handed alpha
Helix 24	AC6	C	312	326	Right-handed alpha
Helix 25	AC7	D	36	40	Right-handed 310
Helix 26	AC8	D	63	70	Right-handed alpha
Helix 27	AC9	D	111	129	Right-handed alpha
Helix 28	AD1	D	131	144	Right-handed alpha
Helix 29	AD2	D	175	177	Right-handed 310
Helix 30	AD3	D	186	202	Right-handed alpha
Helix 31	AD4	D	250	259	Right-handed alpha
Helix 32	AD5	D	296	302	Right-handed alpha
Helix 33	AD6	D	312	326	Right-handed alpha
Helix 34	AD7	E	27	43	Right-handed alpha
Helix 35	AD8	E	117	126	Right-handed alpha
Helix 36	AD9	E	163	168	Right-handed alpha
Helix 37	AE1	E	173	185	Right-handed alpha
Helix 38	AE2	E	230	232	Right-handed 310
Helix 39	AE3	F	19	29	Right-handed alpha
Helix 40	AE4	F	87	93	Right-handed alpha
Helix 41	AE5	F	103	107	Right-handed alpha
Helix 42	AE6	F	112	123	Right-handed alpha
Helix 43	AE7	F	124	129	Right-handed alpha
Helix 44	AE8	F	131	133	Right-handed 310
Helix 45	AE9	F	167	177	Right-handed alpha
Helix 46	AF1	F	191	199	Right-handed alpha
Helix 47	AF2	F	200	206	Right-handed alpha
Helix 48	AF3	F	223	228	Right-handed alpha
Helix 49	AF4	F	229	231	Right-handed 310
Helix 50	AF5	F	255	266	Right-handed alpha
Helix 51	AF6	F	273	277	Right-handed 310
Helix 52	AF7	F	282	293	Right-handed alpha
Helix 53	AF8	F	316	320	Right-handed 310
Helix 54	AF9	F	326	339	Right-handed alpha
Helix 55	AG1	G	36	40	Right-handed 310
Helix 56	AG2	G	102	104	Right-handed 310
Helix 57	AG3	G	111	129	Right-handed alpha
Helix 58	AG4	G	131	144	Right-handed alpha
Helix 59	AG5	G	186	202	Right-handed alpha
Helix 60	AG6	G	250	259	Right-handed alpha
Helix 61	AG7	G	296	303	Right-handed alpha
Helix 62	AG8	G	312	324	Right-handed alpha
Helix 63	AG9	H	111	129	Right-handed alpha
Helix 64	AH1	H	131	144	Right-handed alpha
Helix 65	AH2	H	186	201	Right-handed alpha
Helix 66	AH3	H	250	259	Right-handed alpha
Helix 67	AH4	H	296	306	Right-handed alpha
Helix 68	AH5	H	312	326	Right-handed alpha
Helix 69	AH6	M	15	23	Right-handed alpha
Helix 70	AH7	M	23	35	Right-handed alpha
Helix 71	AH8	M	68	71	Right-handed 310
Helix 72	AH9	M	72	77	Right-handed alpha
Helix 73	AI1	M	107	118	Right-handed alpha
Helix 74	AI2	M	126	139	Right-handed alpha

There are 43 sheets in PDB entry 8Z0L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	106	109	first strand
Strand 2	A	19	21	anti-parallel
Strand 3	A	327	328	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	25	27	first strand
Strand 2	A	90	99	anti-parallel
Strand 3	A	207	216	anti-parallel
Strand 4	A	158	164	anti-parallel
Strand 5	A	167	168	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	45	46	first strand
Strand 2	A	31	35	anti-parallel
Strand 3	A	90	99	anti-parallel
Strand 4	A	207	216	anti-parallel
Strand 5	A	158	164	anti-parallel
Strand 6	A	172	173	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	50	57	first strand
Strand 2	A	74	81	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	242	243	first strand
Strand 2	A	246	247	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	106	109	first strand
Strand 2	B	19	21	anti-parallel
Strand 3	B	327	328	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	25	27	first strand
Strand 2	B	90	99	anti-parallel
Strand 3	B	207	216	anti-parallel
Strand 4	B	158	164	anti-parallel
Strand 5	B	167	168	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	45	46	first strand
Strand 2	B	31	35	anti-parallel
Strand 3	B	90	99	anti-parallel
Strand 4	B	207	216	anti-parallel
Strand 5	B	158	164	anti-parallel
Strand 6	B	172	173	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	50	57	first strand
Strand 2	B	74	81	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	242	243	first strand
Strand 2	B	246	247	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	260	262	first strand
Strand 2	B	275	276	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	106	108	first strand
Strand 2	C	20	21	anti-parallel
Strand 3	C	327	328	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	25	27	first strand
Strand 2	C	90	99	anti-parallel
Strand 3	C	207	216	anti-parallel
Strand 4	C	158	164	anti-parallel
Strand 5	C	167	168	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	45	46	first strand
Strand 2	C	31	35	anti-parallel
Strand 3	C	90	99	anti-parallel
Strand 4	C	207	216	anti-parallel
Strand 5	C	158	164	anti-parallel
Strand 6	C	172	173	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	50	57	first strand
Strand 2	C	74	81	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	242	243	first strand
Strand 2	C	246	247	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	19	21	first strand
Strand 2	D	106	109	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	25	27	first strand
Strand 2	D	90	99	anti-parallel
Strand 3	D	207	216	anti-parallel
Strand 4	D	158	164	anti-parallel
Strand 5	D	167	168	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	45	46	first strand
Strand 2	D	31	35	anti-parallel
Strand 3	D	90	99	anti-parallel
Strand 4	D	207	216	anti-parallel
Strand 5	D	158	164	anti-parallel
Strand 6	D	172	173	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	50	56	first strand
Strand 2	D	75	81	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	242	243	first strand
Strand 2	D	246	247	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	260	262	first strand
Strand 2	D	275	276	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	282	283	first strand
Strand 2	D	288	289	anti-parallel

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There are 9 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	137	138	first strand
Strand 2	E	2	16	anti-parallel
Strand 3	E	100	112	anti-parallel
Strand 4	E	51	63	anti-parallel
Strand 5	E	157	161	anti-parallel
Strand 6	E	213	228	anti-parallel
Strand 7	E	188	197	anti-parallel
Strand 8	E	248	252	anti-parallel
Strand 9	E	241	244	anti-parallel

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There are 8 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	143	146	first strand
Strand 2	E	2	16	anti-parallel
Strand 3	E	100	112	anti-parallel
Strand 4	E	51	63	anti-parallel
Strand 5	E	157	161	anti-parallel
Strand 6	E	213	228	anti-parallel
Strand 7	F	157	163	parallel
Strand 8	F	148	154	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	22	24	first strand
Strand 2	F	210	214	parallel
Strand 3	F	184	186	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	65	67	first strand
Strand 2	E	73	75	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	35	37	first strand
Strand 2	F	78	80	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	39	40	first strand
Strand 2	F	53	54	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	301	304	first strand
Strand 2	F	321	324	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	106	109	first strand
Strand 2	G	19	21	anti-parallel
Strand 3	G	327	328	anti-parallel

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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	25	27	first strand
Strand 2	G	90	99	anti-parallel
Strand 3	G	207	216	anti-parallel
Strand 4	G	158	164	anti-parallel
Strand 5	G	167	168	anti-parallel

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There are 6 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	45	46	first strand
Strand 2	G	31	35	anti-parallel
Strand 3	G	90	99	anti-parallel
Strand 4	G	207	216	anti-parallel
Strand 5	G	158	164	anti-parallel
Strand 6	G	172	173	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	50	53	first strand
Strand 2	G	78	81	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	242	243	first strand
Strand 2	G	246	247	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	260	262	first strand
Strand 2	G	275	276	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	19	21	first strand
Strand 2	H	106	109	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	25	27	first strand
Strand 2	H	90	99	anti-parallel
Strand 3	H	31	35	anti-parallel
Strand 4	H	45	46	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	25	27	first strand
Strand 2	H	90	99	anti-parallel
Strand 3	H	207	215	anti-parallel
Strand 4	H	158	164	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	242	243	first strand
Strand 2	H	246	247	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	40	42	first strand
Strand 2	M	58	62	anti-parallel
Strand 3	M	2	8	anti-parallel
Strand 4	M	84	86	anti-parallel

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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	40	42	first strand
Strand 2	M	58	62	anti-parallel
Strand 3	M	2	8	anti-parallel
Strand 4	M	91	92	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	99	100	first strand
Strand 2	M	160	161	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8Z0L

Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z0L