Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z0O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8Z0O entry

There are 2 chains in PDB entry 8Z0O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 23VAL 859
B
 HIS 23VAL 859
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 66 helices in PDB entry 8Z0O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
23 37Right-handed alpha
Helix 2
AA2
A
93 110Right-handed alpha
Helix 3
AA3
A
112 134Right-handed alpha
Helix 4
AA4
A
136 147Right-handed alpha
Helix 5
AA5
A
150 161Right-handed alpha
Helix 6
AA6
A
194 199Right-handed alpha
Helix 7
AA7
A
210 215Right-handed 310
Helix 8
AA8
A
221 227Right-handed alpha
Helix 9
AA9
A
242 262Right-handed alpha
Helix 10
AB1
A
279 282Right-handed 310
Helix 11
AB2
A
297 307Right-handed alpha
Helix 12
AB3
A
311 319Right-handed alpha
Helix 13
AB4
A
357 374Right-handed alpha
Helix 14
AB5
A
390 403Right-handed alpha
Helix 15
AB6
A
423 447Right-handed alpha
Helix 16
AB7
A
467 474Right-handed alpha
Helix 17
AB8
A
474 479Right-handed alpha
Helix 18
AB9
A
480 485Right-handed alpha
Helix 19
AC1
A
488 489Right-handed 310
Helix 20
AC2
A
491 494Right-handed 310
Helix 21
AC3
A
495 505Right-handed alpha
Helix 22
AC4
A
528 554Right-handed alpha
Helix 23
AC5
A
555 560Right-handed alpha
Helix 24
AC6
A
564 587Right-handed alpha
Helix 25
AC7
A
587 605Right-handed alpha
Helix 26
AC8
A
620 646Right-handed alpha
Helix 27
AC9
A
652 681Right-handed alpha
Helix 28
AD1
A
684 696Right-handed alpha
Helix 29
AD2
A
696 706Right-handed alpha
Helix 30
AD3
A
708 720Right-handed alpha
Helix 31
AD4
A
721 736Right-handed alpha
Helix 32
AD5
A
764 819Right-handed alpha
Helix 33
AD6
A
820 853Right-handed alpha
Helix 34
AD7
A
854 858Right-handed 310
Helix 35
AD8
B
24 37Right-handed alpha
Helix 36
AD9
B
93 110Right-handed alpha
Helix 37
AE1
B
112 121Right-handed alpha
Helix 38
AE2
B
136 163Right-handed alpha
Helix 39
AE3
B
194 199Right-handed alpha
Helix 40
AE4
B
210 215Right-handed 310
Helix 41
AE5
B
221 227Right-handed alpha
Helix 42
AE6
B
242 262Right-handed alpha
Helix 43
AE7
B
279 282Right-handed 310
Helix 44
AE8
B
297 307Right-handed alpha
Helix 45
AE9
B
311 319Right-handed alpha
Helix 46
AF1
B
357 374Right-handed alpha
Helix 47
AF2
B
390 403Right-handed alpha
Helix 48
AF3
B
423 447Right-handed alpha
Helix 49
AF4
B
467 474Right-handed alpha
Helix 50
AF5
B
474 479Right-handed alpha
Helix 51
AF6
B
480 485Right-handed alpha
Helix 52
AF7
B
485 492Right-handed alpha
Helix 53
AF8
B
495 505Right-handed alpha
Helix 54
AF9
B
528 554Right-handed alpha
Helix 55
AG1
B
554 560Right-handed alpha
Helix 56
AG2
B
564 587Right-handed alpha
Helix 57
AG3
B
587 605Right-handed alpha
Helix 58
AG4
B
619 646Right-handed alpha
Helix 59
AG5
B
652 681Right-handed alpha
Helix 60
AG6
B
684 695Right-handed alpha
Helix 61
AG7
B
696 706Right-handed alpha
Helix 62
AG8
B
708 720Right-handed alpha
Helix 63
AG9
B
721 736Right-handed alpha
Helix 64
AH1
B
764 819Right-handed alpha
Helix 65
AH2
B
820 853Right-handed alpha
Helix 66
AH3
B
854 858Right-handed 310
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There are 4 sheets in PDB entry 8Z0O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
177 180first strand
Strand 2
A
200 206anti-parallel
Strand 3
A
326 333anti-parallel
Strand 4
A
345 352anti-parallel
Strand 5
A
284 290parallel
Strand 6
A
232 238parallel
Strand 7
A
377 382parallel
Strand 8
A
458 461anti-parallel
Strand 9
A
405 414anti-parallel
Strand 10
A
512 523parallel
Strand 11
A
386 387anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
336 337first strand
Strand 2
A
340 341anti-parallel
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There are 11 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
177 180first strand
Strand 2
B
200 206anti-parallel
Strand 3
B
326 333anti-parallel
Strand 4
B
345 352anti-parallel
Strand 5
B
284 290parallel
Strand 6
B
232 238parallel
Strand 7
B
377 382parallel
Strand 8
B
458 461anti-parallel
Strand 9
B
405 414anti-parallel
Strand 10
B
512 523parallel
Strand 11
B
386 387anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
336 337first strand
Strand 2
B
340 341anti-parallel
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