Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z0P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8Z0P entry

There is 1 chain in PDB entry 8Z0P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 57ALA 772
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 8Z0P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
114 119Right-handed alpha
Helix 2
AA2
A
120 130Right-handed alpha
Helix 3
AA3
A
147 156Right-handed alpha
Helix 4
AA4
A
313 315Right-handed 310
Helix 5
AA5
A
316 322Right-handed alpha
Helix 6
AA6
A
324 329Right-handed 310
Helix 7
AA7
A
345 351Right-handed alpha
Helix 8
AA8
A
380 391Right-handed alpha
Helix 9
AA9
A
442 451Right-handed alpha
Helix 10
AB1
A
455 467Right-handed alpha
Helix 11
AB2
A
519 529Right-handed alpha
Helix 12
AB3
A
531 536Right-handed alpha
Helix 13
AB4
A
554 569Right-handed alpha
Helix 14
AB5
A
583 595Right-handed alpha
Helix 15
AB6
A
598 600Right-handed 310
Helix 16
AB7
A
608 611Right-handed 310
Helix 17
AB8
A
620 632Right-handed alpha
Helix 18
AB9
A
671 676Right-handed alpha
Helix 19
AC1
A
693 700Right-handed alpha
Helix 20
AC2
A
704 715Right-handed alpha
Helix 21
AC3
A
755 757Right-handed 310
Helix 22
AC4
A
759 762Right-handed 310
Helix 23
AC5
A
763 771Right-handed alpha
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There are 7 sheets in PDB entry 8Z0P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 75first strand
Strand 2
A
59 65anti-parallel
Strand 3
A
422 426anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 109first strand
Strand 2
A
135 139parallel
Strand 3
A
162 166parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 185first strand
Strand 2
A
240 244anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
308 310first strand
Strand 2
A
339 343parallel
Strand 3
A
366 369parallel
Strand 4
A
416 418parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
510 512first strand
Strand 2
A
501 507anti-parallel
Strand 3
A
482 487anti-parallel
Strand 4
A
750 753anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
541 543first strand
Strand 2
A
576 580parallel
Strand 3
A
602 606parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
634 641first strand
Strand 2
A
649 655anti-parallel
Strand 3
A
660 663anti-parallel
Strand 4
A
682 686parallel
Strand 5
A
719 723parallel
Strand 6
A
743 745parallel
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