Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z0X

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8Z0X entry

There are 8 chains in PDB entry 8Z0X (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 2	ASN 294
B	GLN 2	ARG 296
C	GLN 2	ASP 295
D	ILE 3	ASN 294
E	ILE 3	ASN 294
F	LEU 161	ASP 295
G	ILE 3	ASN 294
H	GLN 2	ASN 294

There are107 helices in PDB entry 8Z0X. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	18	31	Right-handed alpha
Helix 2	AA2	A	54	61	Right-handed alpha
Helix 3	AA3	A	71	80	Right-handed alpha
Helix 4	AA4	A	85	89	Right-handed 310
Helix 5	AA5	A	102	116	Right-handed alpha
Helix 6	AA6	A	128	135	Right-handed alpha
Helix 7	AA7	A	144	158	Right-handed alpha
Helix 8	AA8	A	169	199	Right-handed alpha
Helix 9	AA9	A	202	211	Right-handed alpha
Helix 10	AB1	A	217	229	Right-handed alpha
Helix 11	AB2	A	237	255	Right-handed alpha
Helix 12	AB3	A	259	276	Right-handed alpha
Helix 13	AB4	A	280	282	Right-handed 310
Helix 14	AB5	A	283	294	Right-handed alpha
Helix 15	AB6	B	18	31	Right-handed alpha
Helix 16	AB7	B	54	61	Right-handed alpha
Helix 17	AB8	B	71	80	Right-handed alpha
Helix 18	AB9	B	85	89	Right-handed 310
Helix 19	AC1	B	102	116	Right-handed alpha
Helix 20	AC2	B	128	134	Right-handed alpha
Helix 21	AC3	B	144	151	Right-handed alpha
Helix 22	AC4	B	151	158	Right-handed alpha
Helix 23	AC5	B	169	199	Right-handed alpha
Helix 24	AC6	B	202	211	Right-handed alpha
Helix 25	AC7	B	217	229	Right-handed alpha
Helix 26	AC8	B	237	255	Right-handed alpha
Helix 27	AC9	B	259	276	Right-handed alpha
Helix 28	AD1	B	280	282	Right-handed 310
Helix 29	AD2	B	283	294	Right-handed alpha
Helix 30	AD3	C	18	31	Right-handed alpha
Helix 31	AD4	C	54	62	Right-handed alpha
Helix 32	AD5	C	71	80	Right-handed alpha
Helix 33	AD6	C	85	89	Right-handed 310
Helix 34	AD7	C	102	116	Right-handed alpha
Helix 35	AD8	C	128	134	Right-handed alpha
Helix 36	AD9	C	144	158	Right-handed alpha
Helix 37	AE1	C	169	199	Right-handed alpha
Helix 38	AE2	C	202	211	Right-handed alpha
Helix 39	AE3	C	217	229	Right-handed alpha
Helix 40	AE4	C	237	255	Right-handed alpha
Helix 41	AE5	C	259	276	Right-handed alpha
Helix 42	AE6	C	280	282	Right-handed 310
Helix 43	AE7	C	283	294	Right-handed alpha
Helix 44	AE8	D	18	31	Right-handed alpha
Helix 45	AE9	D	54	61	Right-handed alpha
Helix 46	AF1	D	71	80	Right-handed alpha
Helix 47	AF2	D	85	89	Right-handed 310
Helix 48	AF3	D	102	116	Right-handed alpha
Helix 49	AF4	D	128	134	Right-handed alpha
Helix 50	AF5	D	144	151	Right-handed alpha
Helix 51	AF6	D	151	158	Right-handed alpha
Helix 52	AF7	D	169	199	Right-handed alpha
Helix 53	AF8	D	202	211	Right-handed alpha
Helix 54	AF9	D	217	229	Right-handed alpha
Helix 55	AG1	D	237	255	Right-handed alpha
Helix 56	AG2	D	259	276	Right-handed alpha
Helix 57	AG3	D	280	282	Right-handed 310
Helix 58	AG4	D	283	294	Right-handed alpha
Helix 59	AG5	E	18	31	Right-handed alpha
Helix 60	AG6	E	54	61	Right-handed alpha
Helix 61	AG7	E	71	80	Right-handed alpha
Helix 62	AG8	E	84	89	Right-handed alpha
Helix 63	AG9	E	102	116	Right-handed alpha
Helix 64	AH1	E	128	134	Right-handed alpha
Helix 65	AH2	E	144	158	Right-handed alpha
Helix 66	AH3	E	169	199	Right-handed alpha
Helix 67	AH4	E	202	211	Right-handed alpha
Helix 68	AH5	E	217	229	Right-handed alpha
Helix 69	AH6	E	237	255	Right-handed alpha
Helix 70	AH7	E	259	276	Right-handed alpha
Helix 71	AH8	E	280	282	Right-handed 310
Helix 72	AH9	E	283	294	Right-handed alpha
Helix 73	AI1	F	169	199	Right-handed alpha
Helix 74	AI2	F	202	211	Right-handed alpha
Helix 75	AI3	F	217	229	Right-handed alpha
Helix 76	AI4	F	237	255	Right-handed alpha
Helix 77	AI5	F	259	276	Right-handed alpha
Helix 78	AI6	F	280	282	Right-handed 310
Helix 79	AI7	F	283	294	Right-handed alpha
Helix 80	AI8	G	18	32	Right-handed alpha
Helix 81	AI9	G	54	61	Right-handed alpha
Helix 82	AJ1	G	71	80	Right-handed alpha
Helix 83	AJ2	G	85	89	Right-handed 310
Helix 84	AJ3	G	102	116	Right-handed alpha
Helix 85	AJ4	G	128	134	Right-handed alpha
Helix 86	AJ5	G	144	158	Right-handed alpha
Helix 87	AJ6	G	169	199	Right-handed alpha
Helix 88	AJ7	G	202	211	Right-handed alpha
Helix 89	AJ8	G	217	229	Right-handed alpha
Helix 90	AJ9	G	237	255	Right-handed alpha
Helix 91	AK1	G	259	276	Right-handed alpha
Helix 92	AK2	G	280	282	Right-handed 310
Helix 93	AK3	G	283	293	Right-handed alpha
Helix 94	AK4	H	18	31	Right-handed alpha
Helix 95	AK5	H	54	61	Right-handed alpha
Helix 96	AK6	H	71	80	Right-handed alpha
Helix 97	AK7	H	85	89	Right-handed 310
Helix 98	AK8	H	102	116	Right-handed alpha
Helix 99	AK9	H	128	134	Right-handed alpha
Helix 100	AL1	H	144	158	Right-handed alpha
Helix 101	AL2	H	169	199	Right-handed alpha
Helix 102	AL3	H	202	211	Right-handed alpha
Helix 103	AL4	H	217	229	Right-handed alpha
Helix 104	AL5	H	237	255	Right-handed alpha
Helix 105	AL6	H	259	276	Right-handed alpha
Helix 106	AL7	H	280	282	Right-handed 310
Helix 107	AL8	H	283	294	Right-handed alpha

There are 14 sheets in PDB entry 8Z0X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	34	38	first strand
Strand 2	A	11	15	parallel
Strand 3	A	64	67	parallel
Strand 4	A	94	97	parallel
Strand 5	A	119	122	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	125	126	first strand
Strand 2	A	137	142	anti-parallel
Strand 3	A	159	166	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	34	38	first strand
Strand 2	B	11	15	parallel
Strand 3	B	64	67	parallel
Strand 4	B	94	97	parallel
Strand 5	B	119	122	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	125	126	first strand
Strand 2	B	137	142	anti-parallel
Strand 3	B	159	166	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	34	38	first strand
Strand 2	C	11	15	parallel
Strand 3	C	64	67	parallel
Strand 4	C	94	97	parallel
Strand 5	C	119	122	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	125	126	first strand
Strand 2	C	137	142	anti-parallel
Strand 3	C	159	166	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	34	38	first strand
Strand 2	D	11	15	parallel
Strand 3	D	64	67	parallel
Strand 4	D	94	97	parallel
Strand 5	D	119	122	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	125	126	first strand
Strand 2	D	137	142	anti-parallel
Strand 3	D	159	166	parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	34	38	first strand
Strand 2	E	11	15	parallel
Strand 3	E	64	67	parallel
Strand 4	E	94	97	parallel
Strand 5	E	119	122	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	125	126	first strand
Strand 2	E	137	142	anti-parallel
Strand 3	E	159	166	parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	34	38	first strand
Strand 2	G	11	15	parallel
Strand 3	G	64	67	parallel
Strand 4	G	94	97	parallel
Strand 5	G	119	122	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	125	126	first strand
Strand 2	G	137	142	anti-parallel
Strand 3	G	159	166	parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	34	38	first strand
Strand 2	H	11	15	parallel
Strand 3	H	64	67	parallel
Strand 4	H	94	97	parallel
Strand 5	H	119	122	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	125	126	first strand
Strand 2	H	137	142	anti-parallel
Strand 3	H	159	166	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8Z0X

Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z0X