Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z11

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8Z11 entry

There are 35 chains in PDB entry 8Z11 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 29	PHE 208
B	PHE 31	THR 199
C	GLU 28	GLY 204
D	PRO 68	LEU 245
E	LYS 31	LEU 206
F	ALA 30	TYR 239
G	GLY 31	PRO 197
H	LYS 31	TYR 197
I	ASP 35	ASP 188
J	ALA 30	PHE 200
K	GLU 36	GLY 201
L	VAL 32	PHE 229
M	ALA 25	PHE 217
N	SER 31	PHE 224
O	VAL 31	LEU 205
P	ALA 25	PHE 217
Q	GLY 31	TRP 187
R	VAL 31	LEU 205
S	LEU 31	PHE 235
T	VAL 31	LEU 205
U	LEU 44	THR 185
V	MET 58	VAL 104
W	ALA 25	PHE 217
a	LYS 12	GLY 752
b	THR 3	SER 734
c	SER 2	TYR 81
d	LEU 5	PHE 141
e	ILE 37	ALA 101
f	ASP 24	ARG 184
i	SER 4	ALA 36
j	MET 1	PHE 40
k	ALA 43	LEU 112
l	SER 2	PHE 144
m	MET 1	VAL 30
r	LEU 43	LYS 133

There are249 helices in PDB entry 8Z11. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	61	66	Right-handed alpha
Helix 2	AA2	A	67	93	Right-handed alpha
Helix 3	AA3	A	106	114	Right-handed alpha
Helix 4	AA4	A	115	134	Right-handed alpha
Helix 5	AA5	A	167	197	Right-handed alpha
Helix 6	AA6	A	199	206	Right-handed alpha
Helix 7	AA7	B	32	42	Right-handed alpha
Helix 8	AA8	B	53	80	Right-handed alpha
Helix 9	AA9	B	91	96	Right-handed alpha
Helix 10	AB1	B	97	100	Right-handed 310
Helix 11	AB2	B	108	131	Right-handed alpha
Helix 12	AB3	B	165	187	Right-handed alpha
Helix 13	AB4	B	191	199	Right-handed alpha
Helix 14	AB5	C	56	65	Right-handed alpha
Helix 15	AB6	C	68	91	Right-handed alpha
Helix 16	AB7	C	109	114	Right-handed alpha
Helix 17	AB8	C	118	142	Right-handed alpha
Helix 18	AB9	C	155	161	Right-handed 310
Helix 19	AC1	C	163	195	Right-handed alpha
Helix 20	AC2	D	97	102	Right-handed alpha
Helix 21	AC3	D	103	130	Right-handed alpha
Helix 22	AC4	D	139	151	Right-handed alpha
Helix 23	AC5	D	153	177	Right-handed alpha
Helix 24	AC6	D	195	228	Right-handed alpha
Helix 25	AC7	D	235	240	Right-handed 310
Helix 26	AC8	E	58	62	Right-handed 310
Helix 27	AC9	E	64	92	Right-handed alpha
Helix 28	AD1	E	102	114	Right-handed alpha
Helix 29	AD2	E	119	140	Right-handed alpha
Helix 30	AD3	E	162	189	Right-handed alpha
Helix 31	AD4	E	198	203	Right-handed alpha
Helix 32	AD5	F	44	49	Right-handed alpha
Helix 33	AD6	F	54	58	Right-handed 310
Helix 34	AD7	F	87	93	Right-handed 310
Helix 35	AD8	F	99	126	Right-handed alpha
Helix 36	AD9	F	145	150	Right-handed alpha
Helix 37	AE1	F	151	169	Right-handed alpha
Helix 38	AE2	F	172	179	Right-handed alpha
Helix 39	AE3	F	192	196	Right-handed 310
Helix 40	AE4	F	199	230	Right-handed alpha
Helix 41	AE5	G	57	88	Right-handed alpha
Helix 42	AE6	G	102	110	Right-handed alpha
Helix 43	AE7	G	110	117	Right-handed alpha
Helix 44	AE8	G	119	141	Right-handed alpha
Helix 45	AE9	G	158	189	Right-handed alpha
Helix 46	AF1	H	58	63	Right-handed alpha
Helix 47	AF2	H	64	91	Right-handed alpha
Helix 48	AF3	H	102	114	Right-handed alpha
Helix 49	AF4	H	114	140	Right-handed alpha
Helix 50	AF5	H	159	191	Right-handed alpha
Helix 51	AF6	I	56	87	Right-handed alpha
Helix 52	AF7	I	90	94	Right-handed 310
Helix 53	AF8	I	98	106	Right-handed alpha
Helix 54	AF9	I	107	131	Right-handed alpha
Helix 55	AG1	I	148	180	Right-handed alpha
Helix 56	AG2	I	182	188	Right-handed alpha
Helix 57	AG3	J	58	63	Right-handed alpha
Helix 58	AG4	J	64	92	Right-handed alpha
Helix 59	AG5	J	97	102	Right-handed 310
Helix 60	AG6	J	108	117	Right-handed alpha
Helix 61	AG7	J	117	143	Right-handed alpha
Helix 62	AG8	J	160	193	Right-handed alpha
Helix 63	AG9	K	50	55	Right-handed alpha
Helix 64	AH1	K	58	84	Right-handed alpha
Helix 65	AH2	K	106	112	Right-handed alpha
Helix 66	AH3	K	114	131	Right-handed alpha
Helix 67	AH4	K	162	194	Right-handed alpha
Helix 68	AH5	L	35	39	Right-handed 310
Helix 69	AH6	L	52	57	Right-handed 310
Helix 70	AH7	L	58	88	Right-handed alpha
Helix 71	AH8	L	104	108	Right-handed alpha
Helix 72	AH9	L	110	119	Right-handed alpha
Helix 73	AI1	L	120	141	Right-handed alpha
Helix 74	AI2	L	167	172	Right-handed 310
Helix 75	AI3	L	173	204	Right-handed alpha
Helix 76	AI4	M	26	30	Right-handed 310
Helix 77	AI5	M	34	38	Right-handed 310
Helix 78	AI6	M	52	83	Right-handed alpha
Helix 79	AI7	M	96	101	Right-handed alpha
Helix 80	AI8	M	102	111	Right-handed alpha
Helix 81	AI9	M	112	133	Right-handed alpha
Helix 82	AJ1	M	170	174	Right-handed 310
Helix 83	AJ2	M	175	206	Right-handed alpha
Helix 84	AJ3	N	58	89	Right-handed alpha
Helix 85	AJ4	N	104	108	Right-handed alpha
Helix 86	AJ5	N	111	119	Right-handed alpha
Helix 87	AJ6	N	120	142	Right-handed alpha
Helix 88	AJ7	N	167	172	Right-handed 310
Helix 89	AJ8	N	173	202	Right-handed alpha
Helix 90	AJ9	O	56	87	Right-handed alpha
Helix 91	AK1	O	109	117	Right-handed alpha
Helix 92	AK2	O	118	139	Right-handed alpha
Helix 93	AK3	O	168	198	Right-handed alpha
Helix 94	AK4	P	46	51	Right-handed alpha
Helix 95	AK5	P	52	83	Right-handed alpha
Helix 96	AK6	P	97	101	Right-handed 310
Helix 97	AK7	P	112	133	Right-handed alpha
Helix 98	AK8	P	169	174	Right-handed 310
Helix 99	AK9	P	175	206	Right-handed alpha
Helix 100	AL1	Q	32	36	Right-handed 310
Helix 101	AL2	Q	57	85	Right-handed alpha
Helix 102	AL3	Q	99	108	Right-handed alpha
Helix 103	AL4	Q	108	129	Right-handed alpha
Helix 104	AL5	Q	130	132	Right-handed 310
Helix 105	AL6	Q	153	179	Right-handed alpha
Helix 106	AL7	R	38	42	Right-handed 310
Helix 107	AL8	R	50	55	Right-handed alpha
Helix 108	AL9	R	56	86	Right-handed alpha
Helix 109	AM1	R	111	117	Right-handed alpha
Helix 110	AM2	R	118	139	Right-handed alpha
Helix 111	AM3	R	167	198	Right-handed alpha
Helix 112	AM4	S	32	41	Right-handed alpha
Helix 113	AM5	S	56	60	Right-handed 310
Helix 114	AM6	S	61	93	Right-handed alpha
Helix 115	AM7	S	115	123	Right-handed alpha
Helix 116	AM8	S	124	145	Right-handed alpha
Helix 117	AM9	S	186	214	Right-handed alpha
Helix 118	AN1	T	38	42	Right-handed 310
Helix 119	AN2	T	51	55	Right-handed 310
Helix 120	AN3	T	56	86	Right-handed alpha
Helix 121	AN4	T	103	107	Right-handed alpha
Helix 122	AN5	T	109	117	Right-handed alpha
Helix 123	AN6	T	118	139	Right-handed alpha
Helix 124	AN7	T	167	198	Right-handed alpha
Helix 125	AN8	U	63	91	Right-handed alpha
Helix 126	AN9	U	96	101	Right-handed alpha
Helix 127	AO1	U	106	112	Right-handed alpha
Helix 128	AO2	U	114	139	Right-handed alpha
Helix 129	AO3	U	155	159	Right-handed 310
Helix 130	AO4	U	162	185	Right-handed alpha
Helix 131	AO5	V	81	87	Right-handed alpha
Helix 132	AO6	V	93	99	Right-handed alpha
Helix 133	AO7	W	34	38	Right-handed 310
Helix 134	AO8	W	47	51	Right-handed 310
Helix 135	AO9	W	53	83	Right-handed alpha
Helix 136	AP1	W	95	100	Right-handed alpha
Helix 137	AP2	W	106	111	Right-handed alpha
Helix 138	AP3	W	112	133	Right-handed alpha
Helix 139	AP4	W	169	174	Right-handed 310
Helix 140	AP5	W	175	206	Right-handed alpha
Helix 141	AP6	a	26	31	Right-handed alpha
Helix 142	AP7	a	46	55	Right-handed alpha
Helix 143	AP8	a	58	63	Right-handed alpha
Helix 144	AP9	a	65	98	Right-handed alpha
Helix 145	AQ1	a	100	107	Right-handed alpha
Helix 146	AQ2	a	123	128	Right-handed 310
Helix 147	AQ3	a	143	152	Right-handed alpha
Helix 148	AQ4	a	155	183	Right-handed alpha
Helix 149	AQ5	a	187	192	Right-handed alpha
Helix 150	AQ6	a	193	204	Right-handed alpha
Helix 151	AQ7	a	205	231	Right-handed alpha
Helix 152	AQ8	a	233	237	Right-handed 310
Helix 153	AQ9	a	239	246	Right-handed alpha
Helix 154	AR1	a	246	254	Right-handed alpha
Helix 155	AR2	a	255	260	Right-handed 310
Helix 156	AR3	a	261	266	Right-handed alpha
Helix 157	AR4	a	268	273	Right-handed 310
Helix 158	AR5	a	290	309	Right-handed alpha
Helix 159	AR6	a	321	328	Right-handed alpha
Helix 160	AR7	a	340	348	Right-handed alpha
Helix 161	AR8	a	348	374	Right-handed alpha
Helix 162	AR9	a	383	416	Right-handed alpha
Helix 163	AS1	a	425	432	Right-handed alpha
Helix 164	AS2	a	433	465	Right-handed alpha
Helix 165	AS3	a	467	471	Right-handed 310
Helix 166	AS4	a	481	494	Right-handed alpha
Helix 167	AS5	a	529	556	Right-handed alpha
Helix 168	AS6	a	565	570	Right-handed alpha
Helix 169	AS7	a	578	582	Right-handed 310
Helix 170	AS8	a	587	618	Right-handed alpha
Helix 171	AS9	a	635	640	Right-handed alpha
Helix 172	AT1	a	642	650	Right-handed alpha
Helix 173	AT2	a	650	655	Right-handed alpha
Helix 174	AT3	a	655	660	Right-handed alpha
Helix 175	AT4	a	666	689	Right-handed alpha
Helix 176	AT5	a	690	708	Right-handed alpha
Helix 177	AT6	a	720	752	Right-handed alpha
Helix 178	AT7	b	9	15	Right-handed alpha
Helix 179	AT8	b	18	27	Right-handed alpha
Helix 180	AT9	b	30	34	Right-handed 310
Helix 181	AU1	b	38	72	Right-handed alpha
Helix 182	AU2	b	73	80	Right-handed alpha
Helix 183	AU3	b	97	105	Right-handed alpha
Helix 184	AU4	b	119	128	Right-handed alpha
Helix 185	AU5	b	131	156	Right-handed alpha
Helix 186	AU6	b	164	169	Right-handed alpha
Helix 187	AU7	b	170	181	Right-handed alpha
Helix 188	AU8	b	183	203	Right-handed alpha
Helix 189	AU9	b	222	228	Right-handed alpha
Helix 190	AV1	b	229	234	Right-handed 310
Helix 191	AV2	b	269	288	Right-handed alpha
Helix 192	AV3	b	300	308	Right-handed alpha
Helix 193	AV4	b	310	314	Right-handed 310
Helix 194	AV5	b	321	329	Right-handed alpha
Helix 195	AV6	b	329	355	Right-handed alpha
Helix 196	AV7	b	364	397	Right-handed alpha
Helix 197	AV8	b	406	414	Right-handed alpha
Helix 198	AV9	b	414	446	Right-handed alpha
Helix 199	AW1	b	448	452	Right-handed 310
Helix 200	AW2	b	457	468	Right-handed alpha
Helix 201	AW3	b	476	480	Right-handed 310
Helix 202	AW4	b	483	490	Right-handed alpha
Helix 203	AW5	b	493	503	Right-handed alpha
Helix 204	AW6	b	513	541	Right-handed alpha
Helix 205	AW7	b	549	554	Right-handed alpha
Helix 206	AW8	b	562	566	Right-handed 310
Helix 207	AW9	b	573	603	Right-handed alpha
Helix 208	AX1	b	605	613	Right-handed alpha
Helix 209	AX2	b	615	623	Right-handed alpha
Helix 210	AX3	b	623	628	Right-handed alpha
Helix 211	AX4	b	628	633	Right-handed alpha
Helix 212	AX5	b	643	666	Right-handed alpha
Helix 213	AX6	b	667	685	Right-handed alpha
Helix 214	AX7	b	687	691	Right-handed 310
Helix 215	AX8	b	701	733	Right-handed alpha
Helix 216	AX9	c	15	21	Right-handed alpha
Helix 217	AY1	c	44	48	Right-handed 310
Helix 218	AY2	c	52	58	Right-handed alpha
Helix 219	AY3	c	73	78	Right-handed alpha
Helix 220	AY4	d	65	80	Right-handed alpha
Helix 221	AY5	d	123	127	Right-handed 310
Helix 222	AY6	f	24	28	Right-handed 310
Helix 223	AY7	f	34	52	Right-handed alpha
Helix 224	AY8	f	53	55	Right-handed 310
Helix 225	AY9	f	59	82	Right-handed alpha
Helix 226	AZ1	f	99	101	Right-handed 310
Helix 227	AZ2	f	102	134	Right-handed alpha
Helix 228	AZ3	f	136	143	Right-handed alpha
Helix 229	AZ4	f	145	156	Right-handed alpha
Helix 230	AZ5	f	158	169	Right-handed alpha
Helix 231	AZ6	i	5	16	Right-handed alpha
Helix 232	AZ7	i	16	32	Right-handed alpha
Helix 233	AZ8	j	2	10	Right-handed alpha
Helix 234	AZ9	j	11	34	Right-handed alpha
Helix 235	BA1	k	45	63	Right-handed alpha
Helix 236	BA2	k	75	84	Right-handed alpha
Helix 237	BA3	k	85	110	Right-handed alpha
Helix 238	BA4	l	9	11	Right-handed 310
Helix 239	BA5	l	19	24	Right-handed alpha
Helix 240	BA6	l	24	34	Right-handed alpha
Helix 241	BA7	l	42	66	Right-handed alpha
Helix 242	BA8	l	73	101	Right-handed alpha
Helix 243	BA9	l	112	140	Right-handed alpha
Helix 244	BB1	l	141	144	Right-handed 310
Helix 245	BB2	m	3	30	Right-handed alpha
Helix 246	BB3	r	60	70	Right-handed 310
Helix 247	BB4	r	71	95	Right-handed alpha
Helix 248	BB5	r	108	113	Right-handed alpha
Helix 249	BB6	r	113	132	Right-handed alpha

There are 21 sheets in PDB entry 8Z11. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	131	132	first strand
Strand 2	V	69	70	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	90	91	first strand
Strand 2	K	86	87	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	95	97	first strand
Strand 2	L	102	103	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	89	91	first strand
Strand 2	M	94	95	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	95	97	first strand
Strand 2	N	102	103	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	94	96	first strand
Strand 2	O	101	102	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	94	96	first strand
Strand 2	R	101	102	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	94	96	first strand
Strand 2	T	101	102	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	17	19	first strand
Strand 2	a	184	186	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	114	116	first strand
Strand 2	a	136	139	anti-parallel
Strand 3	a	129	130	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	515	517	first strand
Strand 2	a	520	523	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	620	622	first strand
Strand 2	a	628	630	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	87	90	first strand
Strand 2	b	113	115	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	635	636	first strand
Strand 2	b	639	640	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	65	68	first strand
Strand 2	c	4	8	anti-parallel
Strand 3	d	119	120	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	27	30	first strand
Strand 2	c	38	41	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	57	63	first strand
Strand 2	d	31	38	anti-parallel
Strand 3	d	86	90	anti-parallel
Strand 4	d	96	98	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	42	45	first strand
Strand 2	d	51	54	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	e	85	88	first strand
Strand 2	e	71	74	anti-parallel
Strand 3	e	56	62	anti-parallel
Strand 4	e	42	45	anti-parallel
Strand 5	e	93	97	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	f	29	30	first strand
Strand 2	f	85	86	anti-parallel
Strand 3	f	92	93	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	l	6	7	first strand
Strand 2	l	17	18	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8Z11

Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z11