Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z1R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8Z1R entry

There are 2 chains in PDB entry 8Z1R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 73GLN 588
B
 ALA 73GLN 588
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 8Z1R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
73 91Right-handed alpha
Helix 2
AA2
A
92 96Right-handed 310
Helix 3
AA3
A
103 109Right-handed alpha
Helix 4
AA4
A
118 138Right-handed alpha
Helix 5
AA5
A
148 156Right-handed alpha
Helix 6
AA6
A
165 173Right-handed alpha
Helix 7
AA7
A
189 215Right-handed alpha
Helix 8
AA8
A
217 224Right-handed alpha
Helix 9
AA9
A
243 258Right-handed alpha
Helix 10
AB1
A
284 303Right-handed alpha
Helix 11
AB2
A
325 332Right-handed 310
Helix 12
AB3
A
342 353Right-handed alpha
Helix 13
AB4
A
356 371Right-handed alpha
Helix 14
AB5
A
375 387Right-handed alpha
Helix 15
AB6
A
391 401Right-handed alpha
Helix 16
AB7
A
405 418Right-handed alpha
Helix 17
AB8
A
443 455Right-handed alpha
Helix 18
AB9
A
456 458Right-handed 310
Helix 19
AC1
A
469 484Right-handed alpha
Helix 20
AC2
A
499 503Right-handed 310
Helix 21
AC3
A
505 518Right-handed alpha
Helix 22
AC4
A
528 549Right-handed alpha
Helix 23
AC5
A
549 557Right-handed alpha
Helix 24
AC6
A
557 565Right-handed alpha
Helix 25
AC7
A
566 569Right-handed 310
Helix 26
AC8
A
570 576Right-handed alpha
Helix 27
AC9
A
576 588Right-handed alpha
Helix 28
AD1
B
74 91Right-handed alpha
Helix 29
AD2
B
92 96Right-handed 310
Helix 30
AD3
B
103 110Right-handed alpha
Helix 31
AD4
B
118 138Right-handed alpha
Helix 32
AD5
B
148 156Right-handed alpha
Helix 33
AD6
B
165 173Right-handed alpha
Helix 34
AD7
B
189 216Right-handed alpha
Helix 35
AD8
B
217 224Right-handed alpha
Helix 36
AD9
B
243 258Right-handed alpha
Helix 37
AE1
B
284 303Right-handed alpha
Helix 38
AE2
B
325 331Right-handed 310
Helix 39
AE3
B
342 353Right-handed alpha
Helix 40
AE4
B
356 371Right-handed alpha
Helix 41
AE5
B
376 387Right-handed alpha
Helix 42
AE6
B
391 401Right-handed alpha
Helix 43
AE7
B
405 418Right-handed alpha
Helix 44
AE8
B
443 455Right-handed alpha
Helix 45
AE9
B
456 458Right-handed 310
Helix 46
AF1
B
469 482Right-handed alpha
Helix 47
AF2
B
498 502Right-handed 310
Helix 48
AF3
B
505 518Right-handed alpha
Helix 49
AF4
B
528 549Right-handed alpha
Helix 50
AF5
B
549 557Right-handed alpha
Helix 51
AF6
B
557 564Right-handed alpha
Helix 52
AF7
B
566 569Right-handed 310
Helix 53
AF8
B
570 576Right-handed alpha
Helix 54
AF9
B
576 588Right-handed alpha
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There are 5 sheets in PDB entry 8Z1R. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 144first strand
Strand 2
A
521 526parallel
Strand 3
A
488 492parallel
Strand 4
A
460 463parallel
Strand 5
A
307 312parallel
Strand 6
A
261 265parallel
Strand 7
A
233 236parallel
Strand 8
A
162 164parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
281 282first strand
Strand 2
A
319 320parallel
Strand 3
A
438 439anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
141 144first strand
Strand 2
B
521 526parallel
Strand 3
B
488 492parallel
Strand 4
B
460 463parallel
Strand 5
B
307 312parallel
Strand 6
B
261 265parallel
Strand 7
B
233 236parallel
Strand 8
B
162 164parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
281 282first strand
Strand 2
B
319 320parallel
Strand 3
B
438 439anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
333 334first strand
Strand 2
B
374 375anti-parallel
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