Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z1U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8Z1U entry

There is 1 chain in PDB entry 8Z1U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 1027
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 8Z1U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 8Right-handed alpha
Helix 2
AA2
A
8 29Right-handed alpha
Helix 3
AA3
A
53 61Right-handed alpha
Helix 4
AA4
A
61 69Right-handed alpha
Helix 5
AA5
A
98 114Right-handed alpha
Helix 6
AA6
A
115 117Right-handed 310
Helix 7
AA7
A
118 125Right-handed alpha
Helix 8
AA8
A
149 168Right-handed alpha
Helix 9
AA9
A
188 195Right-handed alpha
Helix 10
AB1
A
198 208Right-handed alpha
Helix 11
AB2
A
241 247Right-handed alpha
Helix 12
AB3
A
261 264Right-handed alpha
Helix 13
AB4
A
297 314Right-handed alpha
Helix 14
AB5
A
329 359Right-handed alpha
Helix 15
AB6
A
360 369Right-handed alpha
Helix 16
AB7
A
369 386Right-handed alpha
Helix 17
AB8
A
390 405Right-handed alpha
Helix 18
AB9
A
405 421Right-handed alpha
Helix 19
AC1
A
425 452Right-handed alpha
Helix 20
AC2
A
453 458Right-handed 310
Helix 21
AC3
A
459 496Right-handed alpha
Helix 22
AC4
A
497 501Right-handed 310
Helix 23
AC5
A
508 534Right-handed alpha
Helix 24
AC6
A
534 556Right-handed alpha
Helix 25
AC7
A
580 599Right-handed alpha
Helix 26
AC8
A
628 633Right-handed 310
Helix 27
AC9
A
634 637Right-handed 310
Helix 28
AD1
A
638 651Right-handed alpha
Helix 29
AD2
A
686 704Right-handed alpha
Helix 30
AD3
A
736 749Right-handed alpha
Helix 31
AD4
A
776 782Right-handed alpha
Helix 32
AD5
A
796 798Right-handed 310
Helix 33
AD6
A
830 842Right-handed alpha
Helix 34
AD7
A
854 866Right-handed alpha
Helix 35
AD8
A
866 887Right-handed alpha
Helix 36
AD9
A
890 897Right-handed alpha
Helix 37
AE1
A
898 914Right-handed alpha
Helix 38
AE2
A
918 946Right-handed alpha
Helix 39
AE3
A
953 984Right-handed alpha
Helix 40
AE4
A
989 1013Right-handed alpha
Helix 41
AE5
A
1014 1026Right-handed alpha
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There are 8 sheets in PDB entry 8Z1U. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 130first strand
Strand 2
A
42 48anti-parallel
Strand 3
A
86 93anti-parallel
Strand 4
A
75 83anti-parallel
Strand 5
A
809 813anti-parallel
Strand 6
A
816 825anti-parallel
Strand 7
A
707 712anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 130first strand
Strand 2
A
42 48anti-parallel
Strand 3
A
86 93anti-parallel
Strand 4
A
75 83anti-parallel
Strand 5
A
809 813anti-parallel
Strand 6
A
816 825anti-parallel
Strand 7
A
675 680anti-parallel
Strand 8
A
850 853anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 177first strand
Strand 2
A
286 292anti-parallel
Strand 3
A
137 143anti-parallel
Strand 4
A
320 327anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
213 215first strand
Strand 2
A
229 232anti-parallel
Strand 3
A
181 187anti-parallel
Strand 4
A
265 271anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
249 252first strand
Strand 2
A
258 260anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
283 284first strand
Strand 2
A
277 280anti-parallel
Strand 3
A
601 608anti-parallel
Strand 4
A
619 626anti-parallel
Strand 5
A
568 574anti-parallel
Strand 6
A
657 662anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
752 754first strand
Strand 2
A
764 767anti-parallel
Strand 3
A
718 724anti-parallel
Strand 4
A
800 806anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
784 786first strand
Strand 2
A
792 794anti-parallel
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