Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z1X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8Z1X entry

There are 4 chains in PDB entry 8Z1X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 339
B
 MET 16PRO 296
C
 ALA 2LEU 327
D
 GLN 10ARG 334
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 8Z1X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 30Right-handed alpha
Helix 2
AA2
A
63 75Right-handed alpha
Helix 3
AA3
A
87 124Right-handed alpha
Helix 4
AA4
A
127 142Right-handed alpha
Helix 5
AA5
A
144 157Right-handed alpha
Helix 6
AA6
A
184 193Right-handed alpha
Helix 7
AA7
A
196 204Right-handed alpha
Helix 8
AA8
A
205 232Right-handed alpha
Helix 9
AA9
A
234 243Right-handed alpha
Helix 10
AB1
A
246 253Right-handed alpha
Helix 11
AB2
A
254 285Right-handed alpha
Helix 12
AB3
A
289 300Right-handed alpha
Helix 13
AB4
A
302 332Right-handed alpha
Helix 14
AB5
A
332 337Right-handed alpha
Helix 15
AB6
B
17 27Right-handed alpha
Helix 16
AB7
B
29 53Right-handed alpha
Helix 17
AB8
B
89 127Right-handed alpha
Helix 18
AB9
B
128 142Right-handed alpha
Helix 19
AC1
B
145 158Right-handed alpha
Helix 20
AC2
B
160 189Right-handed alpha
Helix 21
AC3
B
190 200Right-handed alpha
Helix 22
AC4
B
202 209Right-handed alpha
Helix 23
AC5
B
211 240Right-handed alpha
Helix 24
AC6
B
250 255Right-handed alpha
Helix 25
AC7
B
258 262Right-handed 310
Helix 26
AC8
B
265 294Right-handed alpha
Helix 27
AC9
C
45 54Right-handed alpha
Helix 28
AD1
C
79 87Right-handed alpha
Helix 29
AD2
C
107 121Right-handed alpha
Helix 30
AD3
C
123 138Right-handed alpha
Helix 31
AD4
C
142 147Right-handed 310
Helix 32
AD5
C
150 154Right-handed 310
Helix 33
AD6
C
155 169Right-handed alpha
Helix 34
AD7
C
185 204Right-handed alpha
Helix 35
AD8
C
213 221Right-handed alpha
Helix 36
AD9
C
238 242Right-handed alpha
Helix 37
AE1
C
247 256Right-handed alpha
Helix 38
AE2
C
257 261Right-handed 310
Helix 39
AE3
C
295 300Right-handed alpha
Helix 40
AE4
D
90 100Right-handed alpha
Helix 41
AE5
D
117 130Right-handed alpha
Helix 42
AE6
D
133 149Right-handed alpha
Helix 43
AE7
D
151 157Right-handed 310
Helix 44
AE8
D
158 162Right-handed 310
Helix 45
AE9
D
163 177Right-handed alpha
Helix 46
AF1
D
193 212Right-handed alpha
Helix 47
AF2
D
221 229Right-handed alpha
Helix 48
AF3
D
246 252Right-handed alpha
Helix 49
AF4
D
255 265Right-handed alpha
Helix 50
AF5
D
269 273Right-handed 310
Helix 51
AF6
D
303 308Right-handed 310
Helix 52
AF7
D
323 331Right-handed alpha
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There are 5 sheets in PDB entry 8Z1X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
20 30first strand
Strand 2
C
4 13anti-parallel
Strand 3
C
61 64anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
20 30first strand
Strand 2
C
4 13anti-parallel
Strand 3
C
67 70anti-parallel
Strand 4
C
73 74anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
91 94first strand
Strand 2
C
174 178parallel
Strand 3
C
206 211parallel
Strand 4
C
35 39parallel
Strand 5
C
223 228parallel
Strand 6
C
231 237anti-parallel
Strand 7
C
312 313anti-parallel
Strand 8
C
305 306anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
33 45first strand
Strand 2
D
13 24anti-parallel
Strand 3
D
78 81anti-parallel
Strand 4
D
84 85anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
101 104first strand
Strand 2
D
182 186parallel
Strand 3
D
214 219parallel
Strand 4
D
50 54parallel
Strand 5
D
231 236parallel
Strand 6
D
239 245anti-parallel
Strand 7
D
319 321anti-parallel
Strand 8
D
314 316anti-parallel
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