Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z21


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8Z21 entry

There are 4 chains in PDB entry 8Z21 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 2LYS 303
B
 GLY 22PRO 299
C
 PRO 10LEU 336
D
 GLU 6PRO 333
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 57 helices in PDB entry 8Z21. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 29Right-handed alpha
Helix 2
AA2
A
33 37Right-handed 310
Helix 3
AA3
A
42 53Right-handed alpha
Helix 4
AA4
A
58 72Right-handed alpha
Helix 5
AA5
A
85 121Right-handed alpha
Helix 6
AA6
A
125 141Right-handed alpha
Helix 7
AA7
A
142 155Right-handed alpha
Helix 8
AA8
A
170 202Right-handed alpha
Helix 9
AA9
A
203 212Right-handed alpha
Helix 10
AB1
A
215 223Right-handed alpha
Helix 11
AB2
A
224 235Right-handed alpha
Helix 12
AB3
A
235 255Right-handed alpha
Helix 13
AB4
A
258 269Right-handed alpha
Helix 14
AB5
A
271 301Right-handed alpha
Helix 15
AB6
B
24 36Right-handed alpha
Helix 16
AB7
B
36 60Right-handed alpha
Helix 17
AB8
B
68 72Right-handed 310
Helix 18
AB9
B
93 129Right-handed alpha
Helix 19
AC1
B
130 145Right-handed alpha
Helix 20
AC2
B
148 161Right-handed alpha
Helix 21
AC3
B
163 175Right-handed alpha
Helix 22
AC4
B
176 193Right-handed alpha
Helix 23
AC5
B
193 202Right-handed alpha
Helix 24
AC6
B
205 213Right-handed alpha
Helix 25
AC7
B
214 243Right-handed alpha
Helix 26
AC8
B
248 252Right-handed 310
Helix 27
AC9
B
253 265Right-handed alpha
Helix 28
AD1
B
266 268Right-handed 310
Helix 29
AD2
B
269 298Right-handed alpha
Helix 30
AD3
C
11 15Right-handed alpha
Helix 31
AD4
C
61 71Right-handed alpha
Helix 32
AD5
C
94 99Right-handed alpha
Helix 33
AD6
C
112 117Right-handed alpha
Helix 34
AD7
C
122 135Right-handed alpha
Helix 35
AD8
C
138 153Right-handed alpha
Helix 36
AD9
C
157 162Right-handed alpha
Helix 37
AE1
C
163 164Right-handed 310
Helix 38
AE2
C
165 169Right-handed 310
Helix 39
AE3
C
170 184Right-handed alpha
Helix 40
AE4
C
200 219Right-handed alpha
Helix 41
AE5
C
228 236Right-handed alpha
Helix 42
AE6
C
253 259Right-handed alpha
Helix 43
AE7
C
262 272Right-handed alpha
Helix 44
AE8
C
309 314Right-handed 310
Helix 45
AE9
D
62 71Right-handed alpha
Helix 46
AF1
D
95 101Right-handed alpha
Helix 47
AF2
D
119 132Right-handed alpha
Helix 48
AF3
D
136 152Right-handed alpha
Helix 49
AF4
D
154 160Right-handed 310
Helix 50
AF5
D
161 165Right-handed 310
Helix 51
AF6
D
167 180Right-handed alpha
Helix 52
AF7
D
196 215Right-handed alpha
Helix 53
AF8
D
224 232Right-handed alpha
Helix 54
AF9
D
249 255Right-handed alpha
Helix 55
AG1
D
258 268Right-handed alpha
Helix 56
AG2
D
272 277Right-handed alpha
Helix 57
AG3
D
309 314Right-handed alpha
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There are 5 sheets in PDB entry 8Z21. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
86 87first strand
Strand 2
B
91 92anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
36 46first strand
Strand 2
C
20 29anti-parallel
Strand 3
C
77 85anti-parallel
Strand 4
C
88 89anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
108 109first strand
Strand 2
C
189 193parallel
Strand 3
C
221 226parallel
Strand 4
C
51 55parallel
Strand 5
C
238 243parallel
Strand 6
C
246 252anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
35 48first strand
Strand 2
D
10 23anti-parallel
Strand 3
D
78 83anti-parallel
Strand 4
D
86 87anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
103 106first strand
Strand 2
D
185 189parallel
Strand 3
D
217 222parallel
Strand 4
D
52 56parallel
Strand 5
D
234 239parallel
Strand 6
D
242 248anti-parallel
Strand 7
D
324 326anti-parallel
Strand 8
D
319 320anti-parallel
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