Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z22


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8Z22 entry

There are 4 chains in PDB entry 8Z22 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1163PRO 1313
B
 GLU 1164PRO 1313
C
 ARG 309ARG 401
D
 LYS 310MET 400
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 8Z22. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1286 1288Right-handed 310
Helix 2
AA2
A
1302 1307Right-handed 310
Helix 3
AA3
B
1286 1288Right-handed 310
Helix 4
AA4
B
1302 1307Right-handed 310
Helix 5
AA5
C
310 401Right-handed alpha
Helix 6
AA6
D
311 400Right-handed alpha
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There are 4 sheets in PDB entry 8Z22. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1228 1234first strand
Strand 2
A
1216 1225anti-parallel
Strand 3
A
1259 1268anti-parallel
Strand 4
A
1276 1284anti-parallel
Strand 5
A
1169 1172anti-parallel
Strand 6
A
1309 1311anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1245 1252first strand
Strand 2
A
1194 1203anti-parallel
Strand 3
A
1183 1191anti-parallel
Strand 4
A
1294 1299anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1228 1234first strand
Strand 2
B
1216 1225anti-parallel
Strand 3
B
1260 1268anti-parallel
Strand 4
B
1276 1284anti-parallel
Strand 5
B
1169 1172anti-parallel
Strand 6
B
1309 1311anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1245 1252first strand
Strand 2
B
1194 1203anti-parallel
Strand 3
B
1183 1191anti-parallel
Strand 4
B
1294 1299anti-parallel
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