Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z3K

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8Z3K entry

There are 8 chains in PDB entry 8Z3K (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 2	PRO 629
B	ASN 2	PRO 629
C	ASN 2	PRO 629
D	ASN 2	PRO 629
E	MET 220	PRO 629
F	LEU 221	PRO 629
H	A 1	A 6
I	A 7	A 12

There are150 helices in PDB entry 8Z3K. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	16	23	Right-handed alpha
Helix 2	AA2	A	42	52	Right-handed alpha
Helix 3	AA3	A	71	89	Right-handed alpha
Helix 4	AA4	A	104	119	Right-handed alpha
Helix 5	AA5	A	143	153	Right-handed alpha
Helix 6	AA6	A	198	217	Right-handed alpha
Helix 7	AA7	A	218	221	Right-handed 310
Helix 8	AA8	A	227	232	Right-handed 310
Helix 9	AA9	A	233	241	Right-handed alpha
Helix 10	AB1	A	248	258	Right-handed alpha
Helix 11	AB2	A	268	270	Right-handed 310
Helix 12	AB3	A	273	282	Right-handed alpha
Helix 13	AB4	A	310	316	Right-handed alpha
Helix 14	AB5	A	317	321	Right-handed 310
Helix 15	AB6	A	322	327	Right-handed alpha
Helix 16	AB7	A	328	347	Right-handed alpha
Helix 17	AB8	A	365	384	Right-handed alpha
Helix 18	AB9	A	387	391	Right-handed 310
Helix 19	AC1	A	409	428	Right-handed alpha
Helix 20	AC2	A	450	458	Right-handed alpha
Helix 21	AC3	A	458	465	Right-handed alpha
Helix 22	AC4	A	477	487	Right-handed alpha
Helix 23	AC5	A	502	513	Right-handed alpha
Helix 24	AC6	A	519	527	Right-handed alpha
Helix 25	AC7	A	553	561	Right-handed alpha
Helix 26	AC8	A	577	589	Right-handed alpha
Helix 27	AC9	A	593	608	Right-handed alpha
Helix 28	AD1	A	611	624	Right-handed alpha
Helix 29	AD2	B	16	23	Right-handed alpha
Helix 30	AD3	B	42	53	Right-handed alpha
Helix 31	AD4	B	71	89	Right-handed alpha
Helix 32	AD5	B	104	117	Right-handed alpha
Helix 33	AD6	B	145	155	Right-handed alpha
Helix 34	AD7	B	168	172	Right-handed 310
Helix 35	AD8	B	198	217	Right-handed alpha
Helix 36	AD9	B	218	219	Right-handed 310
Helix 37	AE1	B	220	224	Right-handed 310
Helix 38	AE2	B	226	230	Right-handed 310
Helix 39	AE3	B	233	242	Right-handed alpha
Helix 40	AE4	B	248	258	Right-handed alpha
Helix 41	AE5	B	273	282	Right-handed alpha
Helix 42	AE6	B	310	317	Right-handed alpha
Helix 43	AE7	B	328	346	Right-handed alpha
Helix 44	AE8	B	356	360	Right-handed 310
Helix 45	AE9	B	365	384	Right-handed alpha
Helix 46	AF1	B	409	428	Right-handed alpha
Helix 47	AF2	B	458	465	Right-handed alpha
Helix 48	AF3	B	477	488	Right-handed alpha
Helix 49	AF4	B	502	513	Right-handed alpha
Helix 50	AF5	B	519	527	Right-handed alpha
Helix 51	AF6	B	553	561	Right-handed alpha
Helix 52	AF7	B	570	575	Right-handed alpha
Helix 53	AF8	B	577	589	Right-handed alpha
Helix 54	AF9	B	593	608	Right-handed alpha
Helix 55	AG1	B	611	626	Right-handed alpha
Helix 56	AG2	C	16	22	Right-handed alpha
Helix 57	AG3	C	42	52	Right-handed alpha
Helix 58	AG4	C	71	89	Right-handed alpha
Helix 59	AG5	C	104	119	Right-handed alpha
Helix 60	AG6	C	145	155	Right-handed alpha
Helix 61	AG7	C	198	216	Right-handed alpha
Helix 62	AG8	C	226	232	Right-handed 310
Helix 63	AG9	C	233	240	Right-handed alpha
Helix 64	AH1	C	248	258	Right-handed alpha
Helix 65	AH2	C	273	282	Right-handed alpha
Helix 66	AH3	C	310	318	Right-handed alpha
Helix 67	AH4	C	322	327	Right-handed alpha
Helix 68	AH5	C	328	346	Right-handed alpha
Helix 69	AH6	C	365	384	Right-handed alpha
Helix 70	AH7	C	409	428	Right-handed alpha
Helix 71	AH8	C	446	450	Right-handed 310
Helix 72	AH9	C	451	456	Right-handed 310
Helix 73	AI1	C	457	464	Right-handed alpha
Helix 74	AI2	C	477	487	Right-handed alpha
Helix 75	AI3	C	497	501	Right-handed 310
Helix 76	AI4	C	502	513	Right-handed alpha
Helix 77	AI5	C	519	528	Right-handed alpha
Helix 78	AI6	C	553	560	Right-handed alpha
Helix 79	AI7	C	570	575	Right-handed alpha
Helix 80	AI8	C	577	589	Right-handed alpha
Helix 81	AI9	C	593	608	Right-handed alpha
Helix 82	AJ1	C	611	624	Right-handed alpha
Helix 83	AJ2	D	16	23	Right-handed alpha
Helix 84	AJ3	D	42	53	Right-handed alpha
Helix 85	AJ4	D	71	89	Right-handed alpha
Helix 86	AJ5	D	92	94	Right-handed 310
Helix 87	AJ6	D	104	119	Right-handed alpha
Helix 88	AJ7	D	146	154	Right-handed alpha
Helix 89	AJ8	D	175	179	Right-handed 310
Helix 90	AJ9	D	198	221	Right-handed alpha
Helix 91	AK1	D	222	224	Right-handed 310
Helix 92	AK2	D	233	242	Right-handed alpha
Helix 93	AK3	D	248	258	Right-handed alpha
Helix 94	AK4	D	268	270	Right-handed 310
Helix 95	AK5	D	274	282	Right-handed alpha
Helix 96	AK6	D	310	317	Right-handed alpha
Helix 97	AK7	D	318	322	Right-handed 310
Helix 98	AK8	D	324	327	Right-handed 310
Helix 99	AK9	D	328	347	Right-handed alpha
Helix 100	AL1	D	356	361	Right-handed 310
Helix 101	AL2	D	365	384	Right-handed alpha
Helix 102	AL3	D	387	391	Right-handed 310
Helix 103	AL4	D	410	428	Right-handed alpha
Helix 104	AL5	D	449	465	Right-handed alpha
Helix 105	AL6	D	477	487	Right-handed alpha
Helix 106	AL7	D	502	513	Right-handed alpha
Helix 107	AL8	D	519	525	Right-handed alpha
Helix 108	AL9	D	553	561	Right-handed alpha
Helix 109	AM1	D	570	575	Right-handed alpha
Helix 110	AM2	D	577	589	Right-handed alpha
Helix 111	AM3	D	595	608	Right-handed alpha
Helix 112	AM4	D	611	625	Right-handed alpha
Helix 113	AM5	E	226	230	Right-handed 310
Helix 114	AM6	E	233	242	Right-handed alpha
Helix 115	AM7	E	247	258	Right-handed alpha
Helix 116	AM8	E	268	270	Right-handed 310
Helix 117	AM9	E	274	282	Right-handed alpha
Helix 118	AN1	E	310	317	Right-handed alpha
Helix 119	AN2	E	328	347	Right-handed alpha
Helix 120	AN3	E	356	360	Right-handed 310
Helix 121	AN4	E	365	384	Right-handed alpha
Helix 122	AN5	E	409	428	Right-handed alpha
Helix 123	AN6	E	450	465	Right-handed alpha
Helix 124	AN7	E	477	488	Right-handed alpha
Helix 125	AN8	E	502	512	Right-handed alpha
Helix 126	AN9	E	519	527	Right-handed alpha
Helix 127	AO1	E	553	561	Right-handed alpha
Helix 128	AO2	E	570	575	Right-handed alpha
Helix 129	AO3	E	577	589	Right-handed alpha
Helix 130	AO4	E	595	608	Right-handed alpha
Helix 131	AO5	E	611	623	Right-handed alpha
Helix 132	AO6	F	227	232	Right-handed alpha
Helix 133	AO7	F	233	241	Right-handed alpha
Helix 134	AO8	F	248	257	Right-handed alpha
Helix 135	AO9	F	273	282	Right-handed alpha
Helix 136	AP1	F	310	317	Right-handed alpha
Helix 137	AP2	F	328	345	Right-handed alpha
Helix 138	AP3	F	365	383	Right-handed alpha
Helix 139	AP4	F	409	426	Right-handed alpha
Helix 140	AP5	F	445	454	Right-handed alpha
Helix 141	AP6	F	454	463	Right-handed alpha
Helix 142	AP7	F	478	487	Right-handed alpha
Helix 143	AP8	F	499	502	Right-handed 310
Helix 144	AP9	F	503	513	Right-handed alpha
Helix 145	AQ1	F	519	527	Right-handed alpha
Helix 146	AQ2	F	553	561	Right-handed alpha
Helix 147	AQ3	F	570	575	Right-handed alpha
Helix 148	AQ4	F	577	589	Right-handed alpha
Helix 149	AQ5	F	593	608	Right-handed alpha
Helix 150	AQ6	F	611	623	Right-handed alpha

There are 17 sheets in PDB entry 8Z3K. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	5	10	first strand
Strand 2	A	29	35	parallel
Strand 3	A	59	61	parallel
Strand 4	A	190	192	parallel
Strand 5	A	184	187	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	124	128	first strand
Strand 2	A	157	161	anti-parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	260	266	first strand
Strand 2	A	348	355	parallel
Strand 3	A	395	400	parallel
Strand 4	A	436	440	parallel
Strand 5	A	467	471	parallel
Strand 6	A	492	494	parallel
Strand 7	A	515	518	parallel
Strand 8	A	563	566	parallel

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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	160	161	first strand
Strand 2	B	123	125	anti-parallel
Strand 3	B	98	99	parallel
Strand 4	B	7	10	parallel
Strand 5	B	32	35	parallel
Strand 6	B	59	61	parallel
Strand 7	B	190	194	parallel
Strand 8	B	182	186	anti-parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	261	266	first strand
Strand 2	B	350	355	parallel
Strand 3	B	395	400	parallel
Strand 4	B	436	439	parallel
Strand 5	B	467	470	parallel
Strand 6	B	492	494	parallel
Strand 7	B	515	518	parallel
Strand 8	B	564	566	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	403	404	first strand
Strand 2	B	442	443	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	7	10	first strand
Strand 2	C	32	35	parallel
Strand 3	C	59	61	parallel
Strand 4	C	190	191	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	124	125	first strand
Strand 2	C	160	161	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	260	266	first strand
Strand 2	C	348	355	parallel
Strand 3	C	395	404	parallel
Strand 4	C	436	443	parallel
Strand 5	C	467	471	parallel
Strand 6	C	492	494	parallel
Strand 7	C	515	517	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	6	9	first strand
Strand 2	D	96	99	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	34	35	first strand
Strand 2	D	60	61	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	124	128	first strand
Strand 2	D	157	161	anti-parallel

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There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	265	266	first strand
Strand 2	D	351	355	parallel
Strand 3	D	396	400	parallel
Strand 4	D	436	440	parallel
Strand 5	D	467	470	parallel
Strand 6	D	492	494	parallel
Strand 7	D	515	518	parallel
Strand 8	D	564	566	parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	265	266	first strand
Strand 2	E	350	355	parallel
Strand 3	E	395	400	parallel
Strand 4	E	436	439	parallel
Strand 5	E	467	468	parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	492	493	first strand
Strand 2	E	515	518	parallel
Strand 3	E	564	566	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	350	351	first strand
Strand 2	F	395	396	parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	354	355	first strand
Strand 2	F	398	400	parallel
Strand 3	F	436	440	parallel
Strand 4	F	468	470	parallel
Strand 5	F	492	493	parallel
Strand 6	F	515	518	parallel
Strand 7	F	564	566	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8Z3K

Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z3K