Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z41


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8Z41 entry

There is 1 chain in PDB entry 8Z41 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 3LYS 494
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 8Z41. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 28Right-handed alpha
Helix 2
AA2
A
52 73Right-handed alpha
Helix 3
AA3
A
83 96Right-handed alpha
Helix 4
AA4
A
107 124Right-handed alpha
Helix 5
AA5
A
138 146Right-handed alpha
Helix 6
AA6
A
153 165Right-handed alpha
Helix 7
AA7
A
185 188Right-handed 310
Helix 8
AA8
A
189 194Right-handed alpha
Helix 9
AA9
A
197 202Right-handed alpha
Helix 10
AB1
A
214 226Right-handed alpha
Helix 11
AB2
A
228 234Right-handed alpha
Helix 12
AB3
A
236 240Right-handed 310
Helix 13
AB4
A
253 259Right-handed alpha
Helix 14
AB5
A
263 277Right-handed alpha
Helix 15
AB6
A
287 304Right-handed alpha
Helix 16
AB7
A
325 334Right-handed alpha
Helix 17
AB8
A
339 353Right-handed alpha
Helix 18
AB9
A
356 368Right-handed alpha
Helix 19
AC1
A
375 387Right-handed alpha
Helix 20
AC2
A
391 403Right-handed alpha
Helix 21
AC3
A
418 425Right-handed alpha
Helix 22
AC4
A
428 435Right-handed alpha
Helix 23
AC5
A
436 439Right-handed 310
Helix 24
AC6
A
448 452Right-handed 310
Helix 25
AC7
A
453 460Right-handed alpha
Helix 26
AC8
A
474 492Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8Z41.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 81first strand
Strand 2
A
32 39parallel
Strand 3
A
6 11parallel
Strand 4
A
99 102parallel
Strand 5
A
127 129parallel
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