Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z5B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8Z5B entry

There is 1 chain in PDB entry 8Z5B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 44GLU 550
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 8Z5B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
49 53Right-handed 310
Helix 2
AA2
A
159 163Right-handed 310
Helix 3
AA3
A
171 175Right-handed 310
Helix 4
AA4
A
206 213Right-handed alpha
Helix 5
AA5
A
223 229Right-handed 310
Helix 6
AA6
A
233 235Right-handed 310
Helix 7
AA7
A
352 355Right-handed 310
Helix 8
AA8
A
367 370Right-handed 310
Helix 9
AA9
A
402 406Right-handed 310
Helix 10
AB1
A
477 485Right-handed alpha
Helix 11
AB2
A
534 539Right-handed alpha
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There are 7 sheets in PDB entry 8Z5B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 72first strand
Strand 2
A
75 87anti-parallel
Strand 3
A
96 101anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 72first strand
Strand 2
A
75 87anti-parallel
Strand 3
A
118 124parallel
Strand 4
A
185 188anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 113first strand
Strand 2
A
216 222parallel
Strand 3
A
195 201anti-parallel
Strand 4
A
151 154anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
283 284first strand
Strand 2
A
277 280anti-parallel
Strand 3
A
237 245anti-parallel
Strand 4
A
294 301parallel
Strand 5
A
344 350anti-parallel
Strand 6
A
318 323anti-parallel
Strand 7
A
326 334anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
287 290first strand
Strand 2
A
372 378parallel
Strand 3
A
358 363anti-parallel
Strand 4
A
308 312anti-parallel
Strand 5
A
337 339anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
424 428first strand
Strand 2
A
408 418anti-parallel
Strand 3
A
446 453parallel
Strand 4
A
513 520anti-parallel
Strand 5
A
469 475anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
506 509first strand
Strand 2
A
459 463anti-parallel
Strand 3
A
526 532anti-parallel
Strand 4
A
543 548anti-parallel
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