Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z5V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8Z5V entry

There are 34 chains in PDB entry 8Z5V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 255ALA 452
B
ALA 255ALA 452
C
ALA 255ALA 452
D
ALA 255ALA 452
E
ALA 255ALA 452
F
ALA 255ALA 452
G
ALA 255ALA 452
H
ALA 255ALA 452
I
ALA 255ALA 452
J
ALA 255ALA 452
K
ALA 255ALA 452
L
ALA 255ALA 452
M
ALA 255ALA 452
N
ALA 255ALA 452
O
ALA 255ALA 452
P
ALA 255ALA 452
Q
ALA 255ALA 452
R
ALA 255ALA 452
S
ALA 255ALA 452
T
ALA 255ALA 452
U
ALA 255ALA 452
V
ALA 255ALA 452
W
ALA 255ALA 452
X
ALA 255ALA 452
Y
ALA 255ALA 452
Z
ALA 255ALA 452
a
ALA 255ALA 452
b
ALA 255ALA 452
c
ALA 255ALA 452
d
ALA 255ALA 452
e
ALA 255ALA 452
f
ALA 255ALA 452
g
ALA 255ALA 452
h
ALA 255ALA 452
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are102 helices in PDB entry 8Z5V. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
255 286Right-handed alpha
Helix 2
AA2
A
419 434Right-handed alpha
Helix 3
AA3
A
437 441Right-handed 310
Helix 4
AA4
B
256 286Right-handed alpha
Helix 5
AA5
B
419 434Right-handed alpha
Helix 6
AA6
B
437 441Right-handed 310
Helix 7
AA7
C
256 286Right-handed alpha
Helix 8
AA8
C
419 434Right-handed alpha
Helix 9
AA9
C
437 441Right-handed 310
Helix 10
AB1
D
256 286Right-handed alpha
Helix 11
AB2
D
419 434Right-handed alpha
Helix 12
AB3
D
437 441Right-handed 310
Helix 13
AB4
E
256 286Right-handed alpha
Helix 14
AB5
E
419 434Right-handed alpha
Helix 15
AB6
E
437 441Right-handed 310
Helix 16
AB7
F
256 286Right-handed alpha
Helix 17
AB8
F
419 434Right-handed alpha
Helix 18
AB9
F
437 441Right-handed 310
Helix 19
AC1
G
256 286Right-handed alpha
Helix 20
AC2
G
419 434Right-handed alpha
Helix 21
AC3
G
437 441Right-handed 310
Helix 22
AC4
H
256 286Right-handed alpha
Helix 23
AC5
H
419 434Right-handed alpha
Helix 24
AC6
H
437 441Right-handed 310
Helix 25
AC7
I
256 286Right-handed alpha
Helix 26
AC8
I
419 434Right-handed alpha
Helix 27
AC9
I
437 441Right-handed 310
Helix 28
AD1
J
256 286Right-handed alpha
Helix 29
AD2
J
419 434Right-handed alpha
Helix 30
AD3
J
437 441Right-handed 310
Helix 31
AD4
K
256 286Right-handed alpha
Helix 32
AD5
K
419 434Right-handed alpha
Helix 33
AD6
K
437 441Right-handed 310
Helix 34
AD7
L
256 286Right-handed alpha
Helix 35
AD8
L
419 434Right-handed alpha
Helix 36
AD9
L
437 441Right-handed 310
Helix 37
AE1
M
256 286Right-handed alpha
Helix 38
AE2
M
419 434Right-handed alpha
Helix 39
AE3
M
437 441Right-handed 310
Helix 40
AE4
N
256 286Right-handed alpha
Helix 41
AE5
N
419 434Right-handed alpha
Helix 42
AE6
N
437 441Right-handed 310
Helix 43
AE7
O
256 286Right-handed alpha
Helix 44
AE8
O
419 434Right-handed alpha
Helix 45
AE9
O
437 441Right-handed 310
Helix 46
AF1
P
256 286Right-handed alpha
Helix 47
AF2
P
419 434Right-handed alpha
Helix 48
AF3
P
437 441Right-handed 310
Helix 49
AF4
Q
256 286Right-handed alpha
Helix 50
AF5
Q
419 434Right-handed alpha
Helix 51
AF6
Q
437 441Right-handed 310
Helix 52
AF7
R
256 286Right-handed alpha
Helix 53
AF8
R
419 434Right-handed alpha
Helix 54
AF9
R
437 441Right-handed 310
Helix 55
AG1
S
256 286Right-handed alpha
Helix 56
AG2
S
419 434Right-handed alpha
Helix 57
AG3
S
437 441Right-handed 310
Helix 58
AG4
T
256 286Right-handed alpha
Helix 59
AG5
T
419 434Right-handed alpha
Helix 60
AG6
T
437 441Right-handed 310
Helix 61
AG7
U
256 286Right-handed alpha
Helix 62
AG8
U
419 434Right-handed alpha
Helix 63
AG9
U
437 441Right-handed 310
Helix 64
AH1
V
256 286Right-handed alpha
Helix 65
AH2
V
419 434Right-handed alpha
Helix 66
AH3
V
437 441Right-handed 310
Helix 67
AH4
W
256 286Right-handed alpha
Helix 68
AH5
W
419 434Right-handed alpha
Helix 69
AH6
W
437 441Right-handed 310
Helix 70
AH7
X
256 286Right-handed alpha
Helix 71
AH8
X
419 434Right-handed alpha
Helix 72
AH9
X
437 441Right-handed 310
Helix 73
AI1
Y
256 286Right-handed alpha
Helix 74
AI2
Y
419 434Right-handed alpha
Helix 75
AI3
Y
437 441Right-handed 310
Helix 76
AI4
Z
256 286Right-handed alpha
Helix 77
AI5
Z
419 434Right-handed alpha
Helix 78
AI6
Z
437 441Right-handed 310
Helix 79
AI7
a
256 286Right-handed alpha
Helix 80
AI8
a
419 434Right-handed alpha
Helix 81
AI9
a
437 441Right-handed 310
Helix 82
AJ1
b
256 286Right-handed alpha
Helix 83
AJ2
b
419 434Right-handed alpha
Helix 84
AJ3
b
437 441Right-handed 310
Helix 85
AJ4
c
256 286Right-handed alpha
Helix 86
AJ5
c
419 434Right-handed alpha
Helix 87
AJ6
c
437 441Right-handed 310
Helix 88
AJ7
d
256 286Right-handed alpha
Helix 89
AJ8
d
419 434Right-handed alpha
Helix 90
AJ9
d
437 441Right-handed 310
Helix 91
AK1
e
256 286Right-handed alpha
Helix 92
AK2
e
419 434Right-handed alpha
Helix 93
AK3
e
437 441Right-handed 310
Helix 94
AK4
f
256 286Right-handed alpha
Helix 95
AK5
f
419 434Right-handed alpha
Helix 96
AK6
f
437 441Right-handed 310
Helix 97
AK7
g
256 286Right-handed alpha
Helix 98
AK8
g
419 434Right-handed alpha
Helix 99
AK9
g
437 441Right-handed 310
Helix 100
AL1
h
256 286Right-handed alpha
Helix 101
AL2
h
419 434Right-handed alpha
Helix 102
AL3
h
437 441Right-handed 310
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There are 36 sheets in PDB entry 8Z5V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
290 299first strand
Strand 2
A
390 401anti-parallel
Strand 3
A
443 449parallel
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There are 69 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
304 310first strand
Strand 2
A
379 385anti-parallel
Strand 3
h
304 310anti-parallel
Strand 4
h
379 385anti-parallel
Strand 5
g
304 310anti-parallel
Strand 6
g
379 385anti-parallel
Strand 7
f
304 310anti-parallel
Strand 8
f
379 385anti-parallel
Strand 9
e
304 310anti-parallel
Strand 10
e
379 385anti-parallel
Strand 11
d
304 310anti-parallel
Strand 12
d
379 385anti-parallel
Strand 13
c
304 310anti-parallel
Strand 14
c
379 385anti-parallel
Strand 15
b
304 310anti-parallel
Strand 16
b
379 385anti-parallel
Strand 17
a
304 310anti-parallel
Strand 18
a
379 385anti-parallel
Strand 19
Z
304 310anti-parallel
Strand 20
Z
379 385anti-parallel
Strand 21
Y
304 310anti-parallel
Strand 22
Y
379 385anti-parallel
Strand 23
X
304 310anti-parallel
Strand 24
X
379 385anti-parallel
Strand 25
W
304 310anti-parallel
Strand 26
W
379 385anti-parallel
Strand 27
V
304 310anti-parallel
Strand 28
V
379 385anti-parallel
Strand 29
U
304 310anti-parallel
Strand 30
U
379 385anti-parallel
Strand 31
T
304 310anti-parallel
Strand 32
T
379 385anti-parallel
Strand 33
S
304 310anti-parallel
Strand 34
S
379 385anti-parallel
Strand 35
R
304 310anti-parallel
Strand 36
R
379 385anti-parallel
Strand 37
Q
304 310anti-parallel
Strand 38
Q
379 385anti-parallel
Strand 39
P
304 310anti-parallel
Strand 40
P
379 385anti-parallel
Strand 41
O
304 310anti-parallel
Strand 42
O
379 385anti-parallel
Strand 43
N
304 310anti-parallel
Strand 44
N
379 385anti-parallel
Strand 45
M
304 310anti-parallel
Strand 46
M
379 385anti-parallel
Strand 47
L
304 310anti-parallel
Strand 48
L
379 385anti-parallel
Strand 49
K
304 310anti-parallel
Strand 50
K
379 385anti-parallel
Strand 51
J
304 310anti-parallel
Strand 52
J
379 385anti-parallel
Strand 53
I
304 310anti-parallel
Strand 54
I
379 385anti-parallel
Strand 55
H
304 310anti-parallel
Strand 56
H
379 385anti-parallel
Strand 57
G
304 310anti-parallel
Strand 58
G
379 385anti-parallel
Strand 59
F
304 310anti-parallel
Strand 60
F
379 385anti-parallel
Strand 61
E
304 310anti-parallel
Strand 62
E
379 385anti-parallel
Strand 63
D
304 310anti-parallel
Strand 64
D
379 385anti-parallel
Strand 65
C
304 310anti-parallel
Strand 66
C
379 385anti-parallel
Strand 67
B
304 310anti-parallel
Strand 68
B
379 385anti-parallel
Strand 69
A
304 310anti-parallel
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There are 69 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
316 326first strand
Strand 2
A
367 376anti-parallel
Strand 3
B
316 326anti-parallel
Strand 4
B
367 376anti-parallel
Strand 5
C
316 326anti-parallel
Strand 6
C
367 376anti-parallel
Strand 7
D
316 326anti-parallel
Strand 8
D
367 376anti-parallel
Strand 9
E
316 326anti-parallel
Strand 10
E
367 376anti-parallel
Strand 11
F
316 326anti-parallel
Strand 12
F
367 376anti-parallel
Strand 13
G
316 326anti-parallel
Strand 14
G
367 376anti-parallel
Strand 15
H
316 326anti-parallel
Strand 16
H
367 376anti-parallel
Strand 17
I
316 326anti-parallel
Strand 18
I
367 376anti-parallel
Strand 19
J
316 326anti-parallel
Strand 20
J
367 376anti-parallel
Strand 21
K
316 326anti-parallel
Strand 22
K
367 376anti-parallel
Strand 23
L
316 326anti-parallel
Strand 24
L
367 376anti-parallel
Strand 25
M
316 326anti-parallel
Strand 26
M
367 376anti-parallel
Strand 27
N
316 326anti-parallel
Strand 28
N
367 376anti-parallel
Strand 29
O
316 326anti-parallel
Strand 30
O
367 376anti-parallel
Strand 31
P
316 326anti-parallel
Strand 32
P
367 376anti-parallel
Strand 33
Q
316 326anti-parallel
Strand 34
Q
367 376anti-parallel
Strand 35
R
316 326anti-parallel
Strand 36
R
367 376anti-parallel
Strand 37
S
316 326anti-parallel
Strand 38
S
367 376anti-parallel
Strand 39
T
316 326anti-parallel
Strand 40
T
367 376anti-parallel
Strand 41
U
316 326anti-parallel
Strand 42
U
367 376anti-parallel
Strand 43
V
316 326anti-parallel
Strand 44
V
367 376anti-parallel
Strand 45
W
316 326anti-parallel
Strand 46
W
367 376anti-parallel
Strand 47
X
316 326anti-parallel
Strand 48
X
367 376anti-parallel
Strand 49
Y
316 326anti-parallel
Strand 50
Y
367 376anti-parallel
Strand 51
Z
316 326anti-parallel
Strand 52
Z
367 376anti-parallel
Strand 53
a
316 326anti-parallel
Strand 54
a
367 376anti-parallel
Strand 55
b
316 326anti-parallel
Strand 56
b
367 376anti-parallel
Strand 57
c
316 326anti-parallel
Strand 58
c
367 376anti-parallel
Strand 59
d
316 326anti-parallel
Strand 60
d
367 376anti-parallel
Strand 61
e
316 326anti-parallel
Strand 62
e
367 376anti-parallel
Strand 63
f
316 326anti-parallel
Strand 64
f
367 376anti-parallel
Strand 65
g
316 326anti-parallel
Strand 66
g
367 376anti-parallel
Strand 67
h
316 326anti-parallel
Strand 68
h
367 376anti-parallel
Strand 69
A
316 326anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
290 299first strand
Strand 2
B
390 401anti-parallel
Strand 3
B
443 449parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
290 299first strand
Strand 2
C
390 401anti-parallel
Strand 3
C
443 449parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
290 299first strand
Strand 2
D
390 401anti-parallel
Strand 3
D
443 449parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
290 299first strand
Strand 2
E
390 401anti-parallel
Strand 3
E
443 449parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
290 299first strand
Strand 2
F
390 401anti-parallel
Strand 3
F
443 449parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
290 299first strand
Strand 2
G
390 401anti-parallel
Strand 3
G
443 449parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
290 299first strand
Strand 2
H
390 401anti-parallel
Strand 3
H
443 449parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
290 299first strand
Strand 2
I
390 401anti-parallel
Strand 3
I
443 449parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
290 299first strand
Strand 2
J
390 401anti-parallel
Strand 3
J
443 449parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
290 299first strand
Strand 2
K
390 401anti-parallel
Strand 3
K
443 449parallel
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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
290 299first strand
Strand 2
L
390 401anti-parallel
Strand 3
L
443 449parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
290 299first strand
Strand 2
M
390 401anti-parallel
Strand 3
M
443 449parallel
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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
290 299first strand
Strand 2
N
390 401anti-parallel
Strand 3
N
443 449parallel
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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
O
290 299first strand
Strand 2
O
390 401anti-parallel
Strand 3
O
443 449parallel
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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
P
290 299first strand
Strand 2
P
390 401anti-parallel
Strand 3
P
443 449parallel
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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
Q
290 299first strand
Strand 2
Q
390 401anti-parallel
Strand 3
Q
443 449parallel
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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
R
290 299first strand
Strand 2
R
390 401anti-parallel
Strand 3
R
443 449parallel
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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
S
290 299first strand
Strand 2
S
390 401anti-parallel
Strand 3
S
443 449parallel
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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
T
290 299first strand
Strand 2
T
390 401anti-parallel
Strand 3
T
443 449parallel
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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
U
290 299first strand
Strand 2
U
390 401anti-parallel
Strand 3
U
443 449parallel
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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
V
290 299first strand
Strand 2
V
390 401anti-parallel
Strand 3
V
443 449parallel
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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
W
290 299first strand
Strand 2
W
390 401anti-parallel
Strand 3
W
443 449parallel
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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
X
290 299first strand
Strand 2
X
390 401anti-parallel
Strand 3
X
443 449parallel
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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
Y
290 299first strand
Strand 2
Y
390 401anti-parallel
Strand 3
Y
443 449parallel
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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
Z
290 299first strand
Strand 2
Z
390 401anti-parallel
Strand 3
Z
443 449parallel
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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
a
290 299first strand
Strand 2
a
390 401anti-parallel
Strand 3
a
443 449parallel
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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
b
290 299first strand
Strand 2
b
390 401anti-parallel
Strand 3
b
443 449parallel
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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
c
290 299first strand
Strand 2
c
390 401anti-parallel
Strand 3
c
443 449parallel
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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
d
290 299first strand
Strand 2
d
390 401anti-parallel
Strand 3
d
443 449parallel
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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
e
290 299first strand
Strand 2
e
390 401anti-parallel
Strand 3
e
443 449parallel
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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
f
290 299first strand
Strand 2
f
390 401anti-parallel
Strand 3
f
443 449parallel
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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
g
290 299first strand
Strand 2
g
390 401anti-parallel
Strand 3
g
443 449parallel
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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
h
290 299first strand
Strand 2
h
390 401anti-parallel
Strand 3
h
443 449parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il