Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z6B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8Z6B entry

There are 4 chains in PDB entry 8Z6B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 3063TYR 4118
B
 TYR 216MET 698
C
 TYR 216MET 698
D
 SER 219MET 698
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 84 helices in PDB entry 8Z6B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3074 3104Right-handed alpha
Helix 2
AA2
A
3249 3254Right-handed 310
Helix 3
AA3
A
3261 3266Right-handed 310
Helix 4
AA4
A
3278 3302Right-handed alpha
Helix 5
AA5
A
3321 3345Right-handed alpha
Helix 6
AA6
A
3557 3578Right-handed alpha
Helix 7
AA7
A
3581 3602Right-handed alpha
Helix 8
AA8
A
3603 3608Right-handed alpha
Helix 9
AA9
A
3656 3689Right-handed alpha
Helix 10
AB1
A
3693 3708Right-handed alpha
Helix 11
AB2
A
3710 3716Right-handed alpha
Helix 12
AB3
A
3722 3730Right-handed alpha
Helix 13
AB4
A
3731 3736Right-handed alpha
Helix 14
AB5
A
3826 3840Right-handed alpha
Helix 15
AB6
A
3892 3896Right-handed 310
Helix 16
AB7
A
3898 3924Right-handed alpha
Helix 17
AB8
A
3932 3935Right-handed 310
Helix 18
AB9
A
3936 3969Right-handed alpha
Helix 19
AC1
A
3977 4005Right-handed alpha
Helix 20
AC2
A
4006 4009Right-handed 310
Helix 21
AC3
A
4013 4022Right-handed alpha
Helix 22
AC4
A
4022 4049Right-handed alpha
Helix 23
AC5
A
4056 4063Right-handed alpha
Helix 24
AC6
A
4071 4075Right-handed 310
Helix 25
AC7
A
4076 4081Right-handed alpha
Helix 26
AC8
A
4083 4095Right-handed alpha
Helix 27
AC9
A
4097 4099Right-handed 310
Helix 28
AD1
A
4100 4118Right-handed alpha
Helix 29
AD2
B
217 242Right-handed alpha
Helix 30
AD3
B
246 258Right-handed alpha
Helix 31
AD4
B
269 273Right-handed 310
Helix 32
AD5
B
275 284Right-handed alpha
Helix 33
AD6
B
285 292Right-handed alpha
Helix 34
AD7
B
334 338Right-handed 310
Helix 35
AD8
B
363 367Right-handed 310
Helix 36
AD9
B
398 412Right-handed alpha
Helix 37
AE1
B
467 498Right-handed alpha
Helix 38
AE2
B
508 530Right-handed alpha
Helix 39
AE3
B
532 540Right-handed alpha
Helix 40
AE4
B
548 572Right-handed alpha
Helix 41
AE5
B
573 576Right-handed 310
Helix 42
AE6
B
580 620Right-handed alpha
Helix 43
AE7
B
628 642Right-handed alpha
Helix 44
AE8
B
645 652Right-handed alpha
Helix 45
AE9
B
656 670Right-handed alpha
Helix 46
AF1
B
671 697Right-handed alpha
Helix 47
AF2
C
217 240Right-handed alpha
Helix 48
AF3
C
246 258Right-handed alpha
Helix 49
AF4
C
269 273Right-handed 310
Helix 50
AF5
C
275 285Right-handed alpha
Helix 51
AF6
C
285 292Right-handed alpha
Helix 52
AF7
C
349 353Right-handed 310
Helix 53
AF8
C
363 367Right-handed 310
Helix 54
AF9
C
398 412Right-handed alpha
Helix 55
AG1
C
467 495Right-handed alpha
Helix 56
AG2
C
505 530Right-handed alpha
Helix 57
AG3
C
532 541Right-handed alpha
Helix 58
AG4
C
548 572Right-handed alpha
Helix 59
AG5
C
573 576Right-handed 310
Helix 60
AG6
C
580 593Right-handed alpha
Helix 61
AG7
C
593 620Right-handed alpha
Helix 62
AG8
C
628 641Right-handed alpha
Helix 63
AG9
C
646 653Right-handed alpha
Helix 64
AH1
C
656 670Right-handed alpha
Helix 65
AH2
C
672 696Right-handed alpha
Helix 66
AH3
D
220 243Right-handed alpha
Helix 67
AH4
D
246 258Right-handed alpha
Helix 68
AH5
D
269 273Right-handed 310
Helix 69
AH6
D
275 284Right-handed alpha
Helix 70
AH7
D
285 292Right-handed alpha
Helix 71
AH8
D
334 338Right-handed 310
Helix 72
AH9
D
363 367Right-handed 310
Helix 73
AI1
D
370 374Right-handed 310
Helix 74
AI2
D
398 412Right-handed alpha
Helix 75
AI3
D
467 496Right-handed alpha
Helix 76
AI4
D
508 529Right-handed alpha
Helix 77
AI5
D
531 536Right-handed alpha
Helix 78
AI6
D
549 576Right-handed alpha
Helix 79
AI7
D
580 620Right-handed alpha
Helix 80
AI8
D
628 641Right-handed alpha
Helix 81
AI9
D
646 653Right-handed alpha
Helix 82
AJ1
D
656 670Right-handed alpha
Helix 83
AJ2
D
671 673Right-handed 310
Helix 84
AJ3
D
674 697Right-handed alpha
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There are 5 sheets in PDB entry 8Z6B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3138 3142first strand
Strand 2
A
3182 3186anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3819 3821first strand
Strand 2
A
3748 3751anti-parallel
Strand 3
A
3852 3858anti-parallel
Strand 4
A
3863 3872anti-parallel
Strand 5
A
3880 3888anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
391 394first strand
Strand 2
B
320 325anti-parallel
Strand 3
B
419 428anti-parallel
Strand 4
B
436 444anti-parallel
Strand 5
B
452 460anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
391 394first strand
Strand 2
C
320 325anti-parallel
Strand 3
C
419 428anti-parallel
Strand 4
C
436 444anti-parallel
Strand 5
C
452 460anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
391 394first strand
Strand 2
D
320 325anti-parallel
Strand 3
D
419 428anti-parallel
Strand 4
D
436 444anti-parallel
Strand 5
D
452 460anti-parallel
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