Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z6T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8Z6T entry

There are 3 chains in PDB entry 8Z6T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 333LYS 528
C
 SER 2GLU 219
B
 GLN 1VAL 226
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 8Z6T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
349 353Right-handed 310
Helix 2
AA2
A
365 370Right-handed alpha
Helix 3
AA3
A
405 410Right-handed 310
Helix 4
AA4
A
416 422Right-handed alpha
Helix 5
AA5
C
95 99Right-handed 310
Helix 6
AA6
C
142 148Right-handed alpha
Helix 7
AA7
C
202 209Right-handed alpha
Helix 8
AA8
B
69 72Right-handed 310
Helix 9
AA9
B
95 99Right-handed 310
Helix 10
AB1
B
171 173Right-handed 310
Helix 11
AB2
B
216 219Right-handed 310
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There are 14 sheets in PDB entry 8Z6T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
354 358first strand
Strand 2
A
395 403anti-parallel
Strand 3
A
507 514anti-parallel
Strand 4
A
431 437anti-parallel
Strand 5
A
376 379anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
361 362first strand
Strand 2
A
524 525parallel
Strand 3
A
391 392anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
452 454first strand
Strand 2
A
492 494anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
473 474first strand
Strand 2
A
488 489anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
9 14first strand
Strand 2
C
122 127parallel
Strand 3
C
101 106anti-parallel
Strand 4
C
39 44anti-parallel
Strand 5
C
51 55anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
9 14first strand
Strand 2
C
122 127parallel
Strand 3
C
101 106anti-parallel
Strand 4
C
117 118anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
20 24first strand
Strand 2
C
86 91anti-parallel
Strand 3
C
76 83anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
135 139first strand
Strand 2
C
151 160anti-parallel
Strand 3
C
193 201anti-parallel
Strand 4
C
180 182anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
166 170first strand
Strand 2
C
213 217anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 6first strand
Strand 2
B
20 26anti-parallel
Strand 3
B
86 91anti-parallel
Strand 4
B
76 80anti-parallel
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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 13first strand
Strand 2
B
122 126parallel
Strand 3
B
100 106anti-parallel
Strand 4
B
39 44anti-parallel
Strand 5
B
50 57anti-parallel
Strand 6
B
64 67anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 13first strand
Strand 2
B
122 126parallel
Strand 3
B
100 106anti-parallel
Strand 4
B
117 118anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
135 138first strand
Strand 2
B
152 160anti-parallel
Strand 3
B
191 198anti-parallel
Strand 4
B
178 180anti-parallel
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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
166 169first strand
Strand 2
B
210 215anti-parallel
Strand 3
B
220 225anti-parallel
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