Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z6X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8Z6X entry

There are 3 chains in PDB entry 8Z6X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 333LYS 528
C
 SER 2THR 222
B
 GLN 1VAL 226
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 11 helices in PDB entry 8Z6X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
337 343Right-handed alpha
Helix 2
AA2
A
365 370Right-handed alpha
Helix 3
AA3
A
383 390Right-handed 310
Helix 4
AA4
A
406 410Right-handed 310
Helix 5
AA5
A
416 422Right-handed alpha
Helix 6
AA6
C
95 99Right-handed 310
Helix 7
AA7
C
142 148Right-handed alpha
Helix 8
AA8
C
202 208Right-handed alpha
Helix 9
AA9
B
69 72Right-handed 310
Helix 10
AB1
B
95 99Right-handed 310
Helix 11
AB2
B
200 204Right-handed 310
Back to top of page

There are 12 sheets in PDB entry 8Z6X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
354 358first strand
Strand 2
A
395 402anti-parallel
Strand 3
A
508 515anti-parallel
Strand 4
A
431 437anti-parallel
Strand 5
A
376 379anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
473 474first strand
Strand 2
A
488 489anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
9 13first strand
Strand 2
C
122 126parallel
Strand 3
C
101 106anti-parallel
Strand 4
C
39 44anti-parallel
Strand 5
C
51 55anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
9 13first strand
Strand 2
C
122 126parallel
Strand 3
C
101 106anti-parallel
Strand 4
C
117 118anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
19 24first strand
Strand 2
C
86 91anti-parallel
Strand 3
C
76 83anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
135 139first strand
Strand 2
C
151 160anti-parallel
Strand 3
C
193 201anti-parallel
Strand 4
C
180 182anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
174 176first strand
Strand 2
C
168 171anti-parallel
Strand 3
C
213 215anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 6first strand
Strand 2
B
19 26anti-parallel
Strand 3
B
86 91anti-parallel
Strand 4
B
77 81anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 13first strand
Strand 2
B
122 126parallel
Strand 3
B
100 106anti-parallel
Strand 4
B
39 44anti-parallel
Strand 5
B
50 56anti-parallel
Strand 6
B
66 67anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 13first strand
Strand 2
B
122 126parallel
Strand 3
B
100 106anti-parallel
Strand 4
B
117 118anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
137 139first strand
Strand 2
B
151 160anti-parallel
Strand 3
B
191 199anti-parallel
Strand 4
B
178 185anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
166 169first strand
Strand 2
B
210 215anti-parallel
Strand 3
B
220 225anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il