Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z6Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8Z6Y entry

There is 1 chain in PDB entry 8Z6Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0PRO 344
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 8Z6Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 46Right-handed alpha
Helix 2
AA2
A
95 101Right-handed alpha
Helix 3
AA3
A
102 106Right-handed 310
Helix 4
AA4
A
108 113Right-handed alpha
Helix 5
AA5
A
133 135Right-handed 310
Helix 6
AA6
A
144 149Right-handed alpha
Helix 7
AA7
A
150 153Right-handed 310
Helix 8
AA8
A
155 166Right-handed alpha
Helix 9
AA9
A
181 195Right-handed alpha
Helix 10
AB1
A
205 215Right-handed alpha
Helix 11
AB2
A
226 235Right-handed alpha
Helix 12
AB3
A
249 259Right-handed alpha
Helix 13
AB4
A
296 310Right-handed alpha
Helix 14
AB5
A
323 334Right-handed alpha
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There are 4 sheets in PDB entry 8Z6Y. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
14 18first strand
Strand 2
A
1 6anti-parallel
Strand 3
A
58 59anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
128 131first strand
Strand 2
A
28 37anti-parallel
Strand 3
A
63 71anti-parallel
Strand 4
A
83 86anti-parallel
Strand 5
A
137 139anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
128 131first strand
Strand 2
A
28 37anti-parallel
Strand 3
A
339 343anti-parallel
Strand 4
A
316 320parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
219 222first strand
Strand 2
A
198 203parallel
Strand 3
A
174 178parallel
Strand 4
A
240 245parallel
Strand 5
A
260 268parallel
Strand 6
A
288 290parallel
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