Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z73

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8Z73 entry

There are 12 chains in PDB entry 8Z73 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ALA 138
P	THR 3	ARG 8
P	SER 10	SER 10
B	MET 1	ALA 138
C	LYS 4	ARG 8
C	SER 10	SER 10
D	MET 1	ALA 138
E	THR 3	ARG 8
E	SER 10	SER 10
F	MET 1	ALA 138
G	THR 3	ARG 8
G	SER 10	SER 10

There are 12 helices in PDB entry 8Z73. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	38	42	Right-handed 310
Helix 2	AA2	A	43	46	Right-handed 310
Helix 3	AA3	A	128	138	Right-handed alpha
Helix 4	AA4	B	38	42	Right-handed 310
Helix 5	AA5	B	43	46	Right-handed 310
Helix 6	AA6	B	128	136	Right-handed alpha
Helix 7	AA7	D	38	42	Right-handed 310
Helix 8	AA8	D	43	46	Right-handed 310
Helix 9	AA9	D	128	137	Right-handed alpha
Helix 10	AB1	F	38	42	Right-handed 310
Helix 11	AB2	F	43	46	Right-handed 310
Helix 12	AB3	F	128	137	Right-handed alpha

There are 8 sheets in PDB entry 8Z73. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	71	77	first strand
Strand 2	A	30	37	anti-parallel
Strand 3	A	6	19	anti-parallel
Strand 4	A	114	125	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	63	66	first strand
Strand 2	A	48	54	anti-parallel
Strand 3	A	81	89	anti-parallel
Strand 4	A	97	104	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	71	77	first strand
Strand 2	B	30	37	anti-parallel
Strand 3	B	6	19	anti-parallel
Strand 4	B	114	125	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	63	66	first strand
Strand 2	B	48	54	anti-parallel
Strand 3	B	81	89	anti-parallel
Strand 4	B	97	104	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	71	77	first strand
Strand 2	D	30	37	anti-parallel
Strand 3	D	6	19	anti-parallel
Strand 4	D	114	125	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	63	66	first strand
Strand 2	D	48	54	anti-parallel
Strand 3	D	81	89	anti-parallel
Strand 4	D	97	104	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	71	77	first strand
Strand 2	F	30	37	anti-parallel
Strand 3	F	6	19	anti-parallel
Strand 4	F	114	125	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	63	66	first strand
Strand 2	F	48	54	anti-parallel
Strand 3	F	81	89	anti-parallel
Strand 4	F	97	104	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8Z73

Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z73