Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z74


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8Z74 entry

There are 4 chains in PDB entry 8Z74 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 1SER 130
B
 GLN 1SER 130
C
 LYS 25ALA 319
D
 GLY 28ALA 319
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 8Z74. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
61 64Right-handed 310
Helix 2
AA2
A
86 90Right-handed 310
Helix 3
AA3
A
111 115Right-handed 310
Helix 4
AA4
B
86 90Right-handed 310
Helix 5
AA5
B
111 115Right-handed 310
Helix 6
AA6
C
29 56Right-handed alpha
Helix 7
AA7
C
62 91Right-handed alpha
Helix 8
AA8
C
98 133Right-handed alpha
Helix 9
AA9
C
133 144Right-handed alpha
Helix 10
AB1
C
145 167Right-handed alpha
Helix 11
AB2
C
172 176Right-handed 310
Helix 12
AB3
C
190 211Right-handed alpha
Helix 13
AB4
C
211 233Right-handed alpha
Helix 14
AB5
C
236 261Right-handed alpha
Helix 15
AB6
C
261 278Right-handed alpha
Helix 16
AB7
C
280 313Right-handed alpha
Helix 17
AB8
C
313 319Right-handed alpha
Helix 18
AB9
D
29 56Right-handed alpha
Helix 19
AC1
D
64 80Right-handed alpha
Helix 20
AC2
D
81 91Right-handed alpha
Helix 21
AC3
D
98 133Right-handed alpha
Helix 22
AC4
D
133 144Right-handed alpha
Helix 23
AC5
D
145 167Right-handed alpha
Helix 24
AC6
D
172 176Right-handed 310
Helix 25
AC7
D
190 210Right-handed alpha
Helix 26
AC8
D
210 233Right-handed alpha
Helix 27
AC9
D
237 246Right-handed alpha
Helix 28
AD1
D
246 278Right-handed alpha
Helix 29
AD2
D
280 313Right-handed alpha
Helix 30
AD3
D
313 319Right-handed alpha
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There are 7 sheets in PDB entry 8Z74. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 13first strand
Strand 2
A
127 129parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 23first strand
Strand 2
A
77 82anti-parallel
Strand 3
A
69 72anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 59first strand
Strand 2
A
46 50anti-parallel
Strand 3
A
32 38anti-parallel
Strand 4
A
92 99anti-parallel
Strand 5
A
124 125anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 7first strand
Strand 2
B
16 23anti-parallel
Strand 3
B
77 85anti-parallel
Strand 4
B
67 72anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
45 49first strand
Strand 2
B
32 39anti-parallel
Strand 3
B
92 99anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
168 171first strand
Strand 2
C
180 183anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
168 171first strand
Strand 2
D
180 183anti-parallel
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