Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z7B

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8Z7B entry

There are 3 chains in PDB entry 8Z7B (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
D	SER 19	TYR 613
C	GLN 14	ALA 292
A	VAL 320	PHE 592

There are 36 helices in PDB entry 8Z7B. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	D	20	53	Right-handed alpha
Helix 2	AA2	D	55	81	Right-handed alpha
Helix 3	AA3	D	90	101	Right-handed alpha
Helix 4	AA4	D	109	129	Right-handed alpha
Helix 5	AA5	D	144	155	Right-handed alpha
Helix 6	AA6	D	157	172	Right-handed alpha
Helix 7	AA7	D	176	194	Right-handed alpha
Helix 8	AA8	D	198	205	Right-handed alpha
Helix 9	AA9	D	206	208	Right-handed 310
Helix 10	AB1	D	219	252	Right-handed alpha
Helix 11	AB2	D	275	279	Right-handed 310
Helix 12	AB3	D	293	300	Right-handed alpha
Helix 13	AB4	D	303	319	Right-handed alpha
Helix 14	AB5	D	324	331	Right-handed alpha
Helix 15	AB6	D	365	386	Right-handed alpha
Helix 16	AB7	D	387	388	Right-handed 310
Helix 17	AB8	D	389	393	Right-handed 310
Helix 18	AB9	D	399	413	Right-handed alpha
Helix 19	AC1	D	414	422	Right-handed alpha
Helix 20	AC2	D	431	447	Right-handed alpha
Helix 21	AC3	D	448	466	Right-handed alpha
Helix 22	AC4	D	469	471	Right-handed 310
Helix 23	AC5	D	472	484	Right-handed alpha
Helix 24	AC6	D	499	502	Right-handed 310
Helix 25	AC7	D	503	508	Right-handed alpha
Helix 26	AC8	D	512	533	Right-handed alpha
Helix 27	AC9	D	547	559	Right-handed alpha
Helix 28	AD1	D	565	574	Right-handed alpha
Helix 29	AD2	D	581	588	Right-handed alpha
Helix 30	AD3	D	588	599	Right-handed alpha
Helix 31	AD4	A	337	343	Right-handed alpha
Helix 32	AD5	A	365	370	Right-handed alpha
Helix 33	AD6	A	384	390	Right-handed 310
Helix 34	AD7	A	405	407	Right-handed 310
Helix 35	AD8	A	417	422	Right-handed alpha
Helix 36	AD9	A	438	443	Right-handed alpha

There are 12 sheets in PDB entry 8Z7B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	131	133	first strand
Strand 2	D	141	143	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	262	263	first strand
Strand 2	D	487	488	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	347	350	first strand
Strand 2	D	356	359	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	27	30	first strand
Strand 2	C	61	68	anti-parallel
Strand 3	C	78	79	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	27	30	first strand
Strand 2	C	61	68	anti-parallel
Strand 3	C	263	269	anti-parallel
Strand 4	C	90	96	anti-parallel
Strand 5	C	188	197	anti-parallel
Strand 6	C	200	207	anti-parallel
Strand 7	C	224	230	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	42	43	first strand
Strand 2	A	565	567	parallel
Strand 3	A	573	577	anti-parallel
Strand 4	A	584	588	anti-parallel
Strand 5	A	547	554	anti-parallel
Strand 6	A	538	542	anti-parallel
Strand 7	A	324	325	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	48	55	first strand
Strand 2	C	271	279	anti-parallel
Strand 3	C	285	290	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	83	85	first strand
Strand 2	C	237	246	anti-parallel
Strand 3	C	135	144	parallel
Strand 4	C	155	160	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	83	85	first strand
Strand 2	C	237	246	anti-parallel
Strand 3	C	103	107	anti-parallel
Strand 4	C	116	121	anti-parallel
Strand 5	C	126	131	anti-parallel
Strand 6	C	168	170	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	354	358	first strand
Strand 2	A	394	403	anti-parallel
Strand 3	A	507	516	anti-parallel
Strand 4	A	431	437	anti-parallel
Strand 5	A	376	380	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	452	454	first strand
Strand 2	A	492	494	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	473	474	first strand
Strand 2	A	488	489	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8Z7B

Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z7B