Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z7L

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8Z7L entry

There are 3 chains in PDB entry 8Z7L (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 29	MET 697
B	THR 29	MET 697
C	THR 29	MET 697

There are 6 helices in PDB entry 8Z7L. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	297	304	Right-handed alpha
Helix 2	AA2	A	616	620	Right-handed 310
Helix 3	AA3	B	297	304	Right-handed alpha
Helix 4	AA4	B	616	620	Right-handed 310
Helix 5	AA5	C	297	304	Right-handed alpha
Helix 6	AA6	C	616	620	Right-handed 310

There are 15 sheets in PDB entry 8Z7L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	35	37	first strand
Strand 2	A	221	227	parallel
Strand 3	A	203	207	anti-parallel
Strand 4	A	190	194	anti-parallel
Strand 5	A	90	92	anti-parallel
Strand 6	A	267	269	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	42	43	first strand
Strand 2	B	565	567	parallel
Strand 3	B	573	577	anti-parallel
Strand 4	B	584	588	anti-parallel
Strand 5	B	546	554	anti-parallel
Strand 6	B	538	543	anti-parallel
Strand 7	B	325	328	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	47	55	first strand
Strand 2	A	271	279	anti-parallel
Strand 3	A	285	290	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	310	319	first strand
Strand 2	A	592	600	anti-parallel
Strand 3	A	609	612	anti-parallel
Strand 4	A	648	651	anti-parallel
Strand 5	A	642	645	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	325	328	first strand
Strand 2	A	538	543	parallel
Strand 3	A	546	554	anti-parallel
Strand 4	A	584	588	anti-parallel
Strand 5	A	573	577	anti-parallel
Strand 6	A	565	567	anti-parallel
Strand 7	C	42	43	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	664	665	first strand
Strand 2	A	671	675	anti-parallel
Strand 3	A	691	695	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	35	37	first strand
Strand 2	B	221	227	parallel
Strand 3	B	203	207	anti-parallel
Strand 4	B	190	194	anti-parallel
Strand 5	B	90	92	anti-parallel
Strand 6	B	267	269	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	42	43	first strand
Strand 2	C	565	567	parallel
Strand 3	C	573	577	anti-parallel
Strand 4	C	584	588	anti-parallel
Strand 5	C	546	554	anti-parallel
Strand 6	C	538	543	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	47	55	first strand
Strand 2	B	271	279	anti-parallel
Strand 3	B	285	290	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	310	319	first strand
Strand 2	B	592	600	anti-parallel
Strand 3	B	609	612	anti-parallel
Strand 4	B	648	651	anti-parallel
Strand 5	B	642	645	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	664	665	first strand
Strand 2	B	671	675	anti-parallel
Strand 3	B	691	695	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	35	37	first strand
Strand 2	C	221	227	parallel
Strand 3	C	203	207	anti-parallel
Strand 4	C	190	194	anti-parallel
Strand 5	C	90	94	anti-parallel
Strand 6	C	267	269	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	47	55	first strand
Strand 2	C	271	279	anti-parallel
Strand 3	C	285	290	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	310	319	first strand
Strand 2	C	592	600	anti-parallel
Strand 3	C	609	612	anti-parallel
Strand 4	C	648	651	anti-parallel
Strand 5	C	642	645	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	664	665	first strand
Strand 2	C	671	675	anti-parallel
Strand 3	C	691	695	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8Z7L

Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z7L