Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z7N

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8Z7N entry

There are 9 chains in PDB entry 8Z7N (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 38	VAL 511
B	GLY 523	ASP 671
C	LYS 3	LEU 179
D	GLY 38	VAL 511
E	GLY 523	ASP 671
F	LYS 3	LEU 179
G	GLY 38	VAL 511
H	GLY 523	ASP 671
I	LYS 3	LEU 179

There are 42 helices in PDB entry 8Z7N. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	70	79	Right-handed alpha
Helix 2	AA2	A	105	122	Right-handed alpha
Helix 3	AA3	A	345	359	Right-handed alpha
Helix 4	AA4	A	374	379	Right-handed alpha
Helix 5	AA5	A	480	485	Right-handed alpha
Helix 6	AA6	B	536	551	Right-handed alpha
Helix 7	AA7	B	574	600	Right-handed alpha
Helix 8	AA8	B	625	632	Right-handed alpha
Helix 9	AA9	B	635	640	Right-handed alpha
Helix 10	AB1	B	641	643	Right-handed 310
Helix 11	AB2	B	645	669	Right-handed alpha
Helix 12	AB3	C	61	67	Right-handed 310
Helix 13	AB4	C	77	81	Right-handed 310
Helix 14	AB5	C	152	156	Right-handed 310
Helix 15	AB6	D	70	79	Right-handed alpha
Helix 16	AB7	D	105	122	Right-handed alpha
Helix 17	AB8	D	345	359	Right-handed alpha
Helix 18	AB9	D	374	379	Right-handed alpha
Helix 19	AC1	D	480	485	Right-handed alpha
Helix 20	AC2	E	536	551	Right-handed alpha
Helix 21	AC3	E	574	600	Right-handed alpha
Helix 22	AC4	E	625	632	Right-handed alpha
Helix 23	AC5	E	635	640	Right-handed alpha
Helix 24	AC6	E	641	643	Right-handed 310
Helix 25	AC7	E	645	669	Right-handed alpha
Helix 26	AC8	F	61	67	Right-handed 310
Helix 27	AC9	F	77	81	Right-handed 310
Helix 28	AD1	F	152	156	Right-handed 310
Helix 29	AD2	G	70	79	Right-handed alpha
Helix 30	AD3	G	105	122	Right-handed alpha
Helix 31	AD4	G	345	359	Right-handed alpha
Helix 32	AD5	G	374	379	Right-handed alpha
Helix 33	AD6	G	480	485	Right-handed alpha
Helix 34	AD7	H	536	551	Right-handed alpha
Helix 35	AD8	H	574	600	Right-handed alpha
Helix 36	AD9	H	625	632	Right-handed alpha
Helix 37	AE1	H	635	640	Right-handed alpha
Helix 38	AE2	H	641	643	Right-handed 310
Helix 39	AE3	H	645	669	Right-handed alpha
Helix 40	AE4	I	61	67	Right-handed 310
Helix 41	AE5	I	77	81	Right-handed 310
Helix 42	AE6	I	152	156	Right-handed 310

There are 33 sheets in PDB entry 8Z7N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	41	45	first strand
Strand 2	A	501	505	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	59	61	first strand
Strand 2	A	222	224	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	126	129	first strand
Strand 2	A	205	208	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	230	232	first strand
Strand 2	A	493	495	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	290	293	first strand
Strand 2	A	457	462	anti-parallel
Strand 3	A	474	475	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	389	390	first strand
Strand 2	A	425	426	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	15	18	first strand
Strand 2	C	69	72	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	29	30	first strand
Strand 2	C	39	40	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	82	83	first strand
Strand 2	C	96	97	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	102	104	first strand
Strand 2	C	116	120	anti-parallel
Strand 3	C	147	148	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	140	142	first strand
Strand 2	C	129	132	anti-parallel
Strand 3	C	161	164	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	41	45	first strand
Strand 2	D	501	505	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	59	61	first strand
Strand 2	D	222	224	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	126	129	first strand
Strand 2	D	205	208	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	230	232	first strand
Strand 2	D	493	495	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	290	293	first strand
Strand 2	D	457	462	anti-parallel
Strand 3	D	474	475	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	389	390	first strand
Strand 2	D	425	426	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	15	18	first strand
Strand 2	F	69	72	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	29	30	first strand
Strand 2	F	39	40	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	82	83	first strand
Strand 2	F	96	97	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	102	104	first strand
Strand 2	F	116	120	anti-parallel
Strand 3	F	147	148	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	140	142	first strand
Strand 2	F	129	132	anti-parallel
Strand 3	F	161	164	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	41	45	first strand
Strand 2	G	501	505	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	59	61	first strand
Strand 2	G	222	224	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	126	129	first strand
Strand 2	G	205	208	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	230	232	first strand
Strand 2	G	493	495	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	290	293	first strand
Strand 2	G	457	462	anti-parallel
Strand 3	G	474	475	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	389	390	first strand
Strand 2	G	425	426	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	15	18	first strand
Strand 2	I	69	72	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	29	30	first strand
Strand 2	I	39	40	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	82	83	first strand
Strand 2	I	96	97	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	102	104	first strand
Strand 2	I	116	120	anti-parallel
Strand 3	I	147	148	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	140	142	first strand
Strand 2	I	129	132	anti-parallel
Strand 3	I	161	164	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8Z7N

Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z7N