Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z8L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8Z8L entry

There are 2 chains in PDB entry 8Z8L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 MET 1HIS 197
A
 GLN 1SER 115
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 8Z8L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
127 132Right-handed alpha
Helix 2
AA2
A
84 88Right-handed 310
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There are 6 sheets in PDB entry 8Z8L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 11first strand
Strand 2
B
16 23anti-parallel
Strand 3
B
58 64anti-parallel
Strand 4
B
52 53anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 49first strand
Strand 2
B
33 38anti-parallel
Strand 3
B
74 80anti-parallel
Strand 4
B
83 90anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
102 107first strand
Strand 2
B
114 119anti-parallel
Strand 3
B
158 161anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
147 151first strand
Strand 2
B
135 139anti-parallel
Strand 3
B
173 177anti-parallel
Strand 4
B
194 195anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 7first strand
Strand 2
A
17 24anti-parallel
Strand 3
A
75 81anti-parallel
Strand 4
A
66 69anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 12first strand
Strand 2
A
109 113parallel
Strand 3
A
89 96anti-parallel
Strand 4
A
30 37anti-parallel
Strand 5
A
40 48anti-parallel
Strand 6
A
55 57anti-parallel
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