Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z8V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8Z8V entry

There are 2 chains in PDB entry 8Z8V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 4LEU 585
B
 GLU 1SER 115
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 8Z8V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 31Right-handed alpha
Helix 2
AA2
A
35 56Right-handed alpha
Helix 3
AA3
A
65 76Right-handed alpha
Helix 4
AA4
A
88 92Right-handed 310
Helix 5
AA5
A
96 105Right-handed alpha
Helix 6
AA6
A
119 130Right-handed alpha
Helix 7
AA7
A
130 146Right-handed alpha
Helix 8
AA8
A
150 169Right-handed alpha
Helix 9
AA9
A
173 207Right-handed alpha
Helix 10
AB1
A
207 223Right-handed alpha
Helix 11
AB2
A
227 247Right-handed alpha
Helix 12
AB3
A
249 266Right-handed alpha
Helix 13
AB4
A
267 271Right-handed 310
Helix 14
AB5
A
277 281Right-handed 310
Helix 15
AB6
A
282 293Right-handed alpha
Helix 16
AB7
A
305 310Right-handed alpha
Helix 17
AB8
A
314 322Right-handed alpha
Helix 18
AB9
A
322 337Right-handed alpha
Helix 19
AC1
A
342 361Right-handed alpha
Helix 20
AC2
A
365 371Right-handed alpha
Helix 21
AC3
A
372 399Right-handed alpha
Helix 22
AC4
A
399 415Right-handed alpha
Helix 23
AC5
A
419 432Right-handed alpha
Helix 24
AC6
A
432 438Right-handed alpha
Helix 25
AC7
A
444 466Right-handed alpha
Helix 26
AC8
A
470 480Right-handed alpha
Helix 27
AC9
A
483 491Right-handed alpha
Helix 28
AD1
A
503 508Right-handed 310
Helix 29
AD2
A
510 516Right-handed 310
Helix 30
AD3
A
517 536Right-handed alpha
Helix 31
AD4
A
540 561Right-handed alpha
Helix 32
AD5
A
563 583Right-handed alpha
Helix 33
AD6
B
28 32Right-handed 310
Helix 34
AD7
B
62 65Right-handed 310
Helix 35
AD8
B
87 91Right-handed 310
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There are 2 sheets in PDB entry 8Z8V. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 7first strand
Strand 2
B
18 25anti-parallel
Strand 3
B
78 83anti-parallel
Strand 4
B
68 73anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 12first strand
Strand 2
B
109 113parallel
Strand 3
B
92 98anti-parallel
Strand 4
B
34 39anti-parallel
Strand 5
B
46 51anti-parallel
Strand 6
B
58 60anti-parallel
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