Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z8X

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8Z8X entry

There are 2 chains in PDB entry 8Z8X (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 3	TYR 622
B	MET 1	LYS 703

There are 74 helices in PDB entry 8Z8X. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	9	17	Right-handed alpha
Helix 2	AA2	A	27	45	Right-handed alpha
Helix 3	AA3	A	64	75	Right-handed alpha
Helix 4	AA4	A	126	132	Right-handed alpha
Helix 5	AA5	A	134	155	Right-handed alpha
Helix 6	AA6	A	157	167	Right-handed alpha
Helix 7	AA7	A	176	184	Right-handed alpha
Helix 8	AA8	A	185	187	Right-handed 310
Helix 9	AA9	A	246	257	Right-handed alpha
Helix 10	AB1	A	270	272	Right-handed 310
Helix 11	AB2	A	273	287	Right-handed alpha
Helix 12	AB3	A	296	302	Right-handed alpha
Helix 13	AB4	A	304	316	Right-handed alpha
Helix 14	AB5	A	335	344	Right-handed alpha
Helix 15	AB6	A	362	381	Right-handed alpha
Helix 16	AB7	A	382	400	Right-handed alpha
Helix 17	AB8	A	485	493	Right-handed alpha
Helix 18	AB9	A	494	497	Right-handed 310
Helix 19	AC1	A	498	517	Right-handed alpha
Helix 20	AC2	A	540	557	Right-handed alpha
Helix 21	AC3	A	559	581	Right-handed alpha
Helix 22	AC4	A	594	599	Right-handed alpha
Helix 23	AC5	A	604	616	Right-handed alpha
Helix 24	AC6	B	11	20	Right-handed 310
Helix 25	AC7	B	33	47	Right-handed alpha
Helix 26	AC8	B	53	58	Right-handed alpha
Helix 27	AC9	B	66	70	Right-handed 310
Helix 28	AD1	B	80	94	Right-handed alpha
Helix 29	AD2	B	95	109	Right-handed alpha
Helix 30	AD3	B	110	113	Right-handed 310
Helix 31	AD4	B	114	121	Right-handed 310
Helix 32	AD5	B	134	151	Right-handed alpha
Helix 33	AD6	B	157	169	Right-handed alpha
Helix 34	AD7	B	216	224	Right-handed alpha
Helix 35	AD8	B	250	266	Right-handed alpha
Helix 36	AD9	B	274	278	Right-handed 310
Helix 37	AE1	B	279	287	Right-handed alpha
Helix 38	AE2	B	310	326	Right-handed alpha
Helix 39	AE3	B	328	336	Right-handed alpha
Helix 40	AE4	B	336	344	Right-handed alpha
Helix 41	AE5	B	374	378	Right-handed 310
Helix 42	AE6	B	397	409	Right-handed alpha
Helix 43	AE7	B	432	450	Right-handed alpha
Helix 44	AE8	B	455	459	Right-handed 310
Helix 45	AE9	B	482	490	Right-handed 310
Helix 46	AF1	B	496	514	Right-handed alpha
Helix 47	AF2	B	518	537	Right-handed alpha
Helix 48	AF3	B	543	551	Right-handed alpha
Helix 49	AF4	B	558	562	Right-handed 310
Helix 50	AF5	B	568	572	Right-handed 310
Helix 51	AF6	B	575	583	Right-handed alpha
Helix 52	AF7	B	587	595	Right-handed alpha
Helix 53	AF8	B	643	645	Right-handed 310
Helix 54	AF9	B	646	662	Right-handed alpha
Helix 55	AG1	B	679	695	Right-handed alpha
Helix 56	AG2	B	698	709	Right-handed alpha
Helix 57	AG3	C	11	27	Right-handed alpha
Helix 58	AG4	C	27	32	Right-handed alpha
Helix 59	AG5	C	33	36	Right-handed 310
Helix 60	AG6	C	37	42	Right-handed alpha
Helix 61	AG7	C	52	55	Right-handed 310
Helix 62	AG8	C	56	61	Right-handed alpha
Helix 63	AG9	C	102	110	Right-handed alpha
Helix 64	AH1	C	115	123	Right-handed alpha
Helix 65	AH2	C	123	134	Right-handed alpha
Helix 66	AH3	C	166	176	Right-handed alpha
Helix 67	AH4	C	181	187	Right-handed alpha
Helix 68	AH5	C	192	201	Right-handed alpha
Helix 69	AH6	C	202	204	Right-handed 310
Helix 70	AH7	C	208	221	Right-handed alpha
Helix 71	AH8	C	240	245	Right-handed alpha
Helix 72	AH9	C	403	413	Right-handed alpha
Helix 73	AI1	C	431	446	Right-handed alpha
Helix 74	AI2	C	447	455	Right-handed alpha

There are 21 sheets in PDB entry 8Z8X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	50	51	first strand
Strand 2	A	54	55	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	57	59	first strand
Strand 2	A	87	89	anti-parallel
Strand 3	A	94	96	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	98	100	first strand
Strand 2	A	117	119	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	210	211	first strand
Strand 2	A	585	587	anti-parallel
Strand 3	B	460	462	anti-parallel
Strand 4	B	297	300	anti-parallel
Strand 5	B	423	427	anti-parallel
Strand 6	B	416	420	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	240	242	first strand
Strand 2	A	423	431	anti-parallel
Strand 3	A	442	451	anti-parallel
Strand 4	A	472	484	anti-parallel
Strand 5	A	463	469	anti-parallel
Strand 6	A	259	262	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	240	242	first strand
Strand 2	A	423	431	anti-parallel
Strand 3	A	409	417	anti-parallel
Strand 4	A	290	291	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	322	323	first strand
Strand 2	B	353	357	anti-parallel
Strand 3	B	360	364	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	527	530	first strand
Strand 2	A	535	538	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	124	125	first strand
Strand 2	B	132	133	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	173	175	first strand
Strand 2	B	213	215	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	179	180	first strand
Strand 2	B	208	209	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	188	191	first strand
Strand 2	B	201	204	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	242	246	first strand
Strand 2	B	225	230	anti-parallel
Strand 3	B	346	348	parallel
Strand 4	B	384	386	anti-parallel
Strand 5	B	380	381	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	467	470	first strand
Strand 2	B	473	476	anti-parallel
Strand 3	B	479	480	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	608	611	first strand
Strand 2	B	619	622	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	67	69	first strand
Strand 2	C	97	99	anti-parallel
Strand 3	C	85	89	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	78	79	first strand
Strand 2	C	82	83	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	141	143	first strand
Strand 2	C	249	251	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	149	154	first strand
Strand 2	C	224	229	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	339	340	first strand
Strand 2	C	369	376	anti-parallel
Strand 3	C	379	386	anti-parallel
Strand 4	C	389	396	anti-parallel
Strand 5	C	481	483	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	345	352	first strand
Strand 2	C	358	365	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8Z8X

Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z8X