Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z9G

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8Z9G entry

There are 8 chains in PDB entry 8Z9G (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 3	ALA 293
B	GLN 2	ASN 294
C	GLN 2	ASN 294
D	GLN 2	ASN 294
E	ILE 3	ALA 293
F	VAL 65	ASP 295
G	ILE 3	ASP 295
H	GLN 2	ASN 294

There are110 helices in PDB entry 8Z9G. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	18	32	Right-handed alpha
Helix 2	AA2	A	54	61	Right-handed alpha
Helix 3	AA3	A	71	80	Right-handed alpha
Helix 4	AA4	A	85	89	Right-handed 310
Helix 5	AA5	A	102	116	Right-handed alpha
Helix 6	AA6	A	128	134	Right-handed alpha
Helix 7	AA7	A	144	158	Right-handed alpha
Helix 8	AA8	A	169	199	Right-handed alpha
Helix 9	AA9	A	202	211	Right-handed alpha
Helix 10	AB1	A	217	229	Right-handed alpha
Helix 11	AB2	A	237	255	Right-handed alpha
Helix 12	AB3	A	259	276	Right-handed alpha
Helix 13	AB4	A	280	282	Right-handed 310
Helix 14	AB5	A	283	293	Right-handed alpha
Helix 15	AB6	B	18	31	Right-handed alpha
Helix 16	AB7	B	54	61	Right-handed alpha
Helix 17	AB8	B	71	80	Right-handed alpha
Helix 18	AB9	B	85	89	Right-handed 310
Helix 19	AC1	B	102	116	Right-handed alpha
Helix 20	AC2	B	128	134	Right-handed alpha
Helix 21	AC3	B	144	158	Right-handed alpha
Helix 22	AC4	B	169	199	Right-handed alpha
Helix 23	AC5	B	202	211	Right-handed alpha
Helix 24	AC6	B	217	229	Right-handed alpha
Helix 25	AC7	B	237	255	Right-handed alpha
Helix 26	AC8	B	259	276	Right-handed alpha
Helix 27	AC9	B	280	282	Right-handed 310
Helix 28	AD1	B	283	293	Right-handed alpha
Helix 29	AD2	C	18	31	Right-handed alpha
Helix 30	AD3	C	54	61	Right-handed alpha
Helix 31	AD4	C	71	80	Right-handed alpha
Helix 32	AD5	C	85	89	Right-handed 310
Helix 33	AD6	C	102	116	Right-handed alpha
Helix 34	AD7	C	128	134	Right-handed alpha
Helix 35	AD8	C	144	158	Right-handed alpha
Helix 36	AD9	C	169	199	Right-handed alpha
Helix 37	AE1	C	202	211	Right-handed alpha
Helix 38	AE2	C	217	229	Right-handed alpha
Helix 39	AE3	C	237	255	Right-handed alpha
Helix 40	AE4	C	259	276	Right-handed alpha
Helix 41	AE5	C	280	282	Right-handed 310
Helix 42	AE6	C	283	294	Right-handed alpha
Helix 43	AE7	D	18	31	Right-handed alpha
Helix 44	AE8	D	54	61	Right-handed alpha
Helix 45	AE9	D	71	80	Right-handed alpha
Helix 46	AF1	D	85	89	Right-handed 310
Helix 47	AF2	D	102	116	Right-handed alpha
Helix 48	AF3	D	128	134	Right-handed alpha
Helix 49	AF4	D	144	158	Right-handed alpha
Helix 50	AF5	D	169	199	Right-handed alpha
Helix 51	AF6	D	202	211	Right-handed alpha
Helix 52	AF7	D	217	229	Right-handed alpha
Helix 53	AF8	D	237	255	Right-handed alpha
Helix 54	AF9	D	259	276	Right-handed alpha
Helix 55	AG1	D	280	282	Right-handed 310
Helix 56	AG2	D	283	294	Right-handed alpha
Helix 57	AG3	E	18	31	Right-handed alpha
Helix 58	AG4	E	54	61	Right-handed alpha
Helix 59	AG5	E	71	80	Right-handed alpha
Helix 60	AG6	E	85	89	Right-handed 310
Helix 61	AG7	E	102	116	Right-handed alpha
Helix 62	AG8	E	128	134	Right-handed alpha
Helix 63	AG9	E	144	158	Right-handed alpha
Helix 64	AH1	E	169	199	Right-handed alpha
Helix 65	AH2	E	202	211	Right-handed alpha
Helix 66	AH3	E	217	229	Right-handed alpha
Helix 67	AH4	E	237	255	Right-handed alpha
Helix 68	AH5	E	259	276	Right-handed alpha
Helix 69	AH6	E	280	282	Right-handed 310
Helix 70	AH7	E	283	293	Right-handed alpha
Helix 71	AH8	F	71	80	Right-handed alpha
Helix 72	AH9	F	85	86	Right-handed alpha
Helix 73	AI1	F	102	116	Right-handed alpha
Helix 74	AI2	F	144	150	Right-handed alpha
Helix 75	AI3	F	169	199	Right-handed alpha
Helix 76	AI4	F	202	211	Right-handed alpha
Helix 77	AI5	F	217	229	Right-handed alpha
Helix 78	AI6	F	237	255	Right-handed alpha
Helix 79	AI7	F	259	276	Right-handed alpha
Helix 80	AI8	F	280	282	Right-handed 310
Helix 81	AI9	F	283	294	Right-handed alpha
Helix 82	AJ1	G	18	31	Right-handed alpha
Helix 83	AJ2	G	54	61	Right-handed alpha
Helix 84	AJ3	G	71	80	Right-handed alpha
Helix 85	AJ4	G	85	89	Right-handed 310
Helix 86	AJ5	G	102	116	Right-handed alpha
Helix 87	AJ6	G	128	134	Right-handed alpha
Helix 88	AJ7	G	144	158	Right-handed alpha
Helix 89	AJ8	G	169	199	Right-handed alpha
Helix 90	AJ9	G	202	211	Right-handed alpha
Helix 91	AK1	G	217	229	Right-handed alpha
Helix 92	AK2	G	237	255	Right-handed alpha
Helix 93	AK3	G	259	276	Right-handed alpha
Helix 94	AK4	G	280	282	Right-handed 310
Helix 95	AK5	G	283	294	Right-handed alpha
Helix 96	AK6	H	18	32	Right-handed alpha
Helix 97	AK7	H	54	61	Right-handed alpha
Helix 98	AK8	H	71	80	Right-handed alpha
Helix 99	AK9	H	85	89	Right-handed 310
Helix 100	AL1	H	102	116	Right-handed alpha
Helix 101	AL2	H	128	134	Right-handed alpha
Helix 102	AL3	H	144	151	Right-handed alpha
Helix 103	AL4	H	151	158	Right-handed alpha
Helix 104	AL5	H	169	199	Right-handed alpha
Helix 105	AL6	H	202	211	Right-handed alpha
Helix 106	AL7	H	217	229	Right-handed alpha
Helix 107	AL8	H	237	255	Right-handed alpha
Helix 108	AL9	H	259	276	Right-handed alpha
Helix 109	AM1	H	280	282	Right-handed 310
Helix 110	AM2	H	283	294	Right-handed alpha

There are 16 sheets in PDB entry 8Z9G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	34	38	first strand
Strand 2	A	11	15	parallel
Strand 3	A	64	67	parallel
Strand 4	A	94	97	parallel
Strand 5	A	119	122	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	125	126	first strand
Strand 2	A	137	142	anti-parallel
Strand 3	A	159	166	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	34	38	first strand
Strand 2	B	11	15	parallel
Strand 3	B	64	67	parallel
Strand 4	B	94	97	parallel
Strand 5	B	119	122	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	125	126	first strand
Strand 2	B	137	142	anti-parallel
Strand 3	B	159	166	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	34	38	first strand
Strand 2	C	11	15	parallel
Strand 3	C	64	67	parallel
Strand 4	C	94	97	parallel
Strand 5	C	119	122	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	125	126	first strand
Strand 2	C	137	142	anti-parallel
Strand 3	C	159	166	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	34	38	first strand
Strand 2	D	11	15	parallel
Strand 3	D	64	67	parallel
Strand 4	D	94	97	parallel
Strand 5	D	119	122	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	125	126	first strand
Strand 2	D	137	142	anti-parallel
Strand 3	D	159	166	parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	34	38	first strand
Strand 2	E	11	15	parallel
Strand 3	E	64	67	parallel
Strand 4	E	94	97	parallel
Strand 5	E	119	122	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	125	126	first strand
Strand 2	E	137	142	anti-parallel
Strand 3	E	159	166	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	66	67	first strand
Strand 2	F	94	97	parallel
Strand 3	F	119	122	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	140	142	first strand
Strand 2	F	163	166	parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	34	38	first strand
Strand 2	G	11	15	parallel
Strand 3	G	64	67	parallel
Strand 4	G	94	97	parallel
Strand 5	G	119	122	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	125	126	first strand
Strand 2	G	137	142	anti-parallel
Strand 3	G	159	166	parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	34	38	first strand
Strand 2	H	11	15	parallel
Strand 3	H	64	67	parallel
Strand 4	H	94	97	parallel
Strand 5	H	119	122	parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	125	126	first strand
Strand 2	H	137	142	anti-parallel
Strand 3	H	159	166	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8Z9G

Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z9G