Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z9I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8Z9I entry

There are 4 chains in PDB entry 8Z9I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
O
 THR 333HIS 527
A
 SER 19SER 614
E
 THR 333HIS 528
F
 SER 19LEU 262
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 82 helices in PDB entry 8Z9I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
O
337 343Right-handed alpha
Helix 2
AA2
O
365 370Right-handed alpha
Helix 3
AA3
O
385 389Right-handed 310
Helix 4
AA4
O
405 410Right-handed 310
Helix 5
AA5
O
416 422Right-handed alpha
Helix 6
AA6
O
438 443Right-handed alpha
Helix 7
AA7
O
502 505Right-handed 310
Helix 8
AA8
A
20 52Right-handed alpha
Helix 9
AA9
A
55 81Right-handed alpha
Helix 10
AB1
A
90 102Right-handed alpha
Helix 11
AB2
A
109 130Right-handed alpha
Helix 12
AB3
A
146 155Right-handed alpha
Helix 13
AB4
A
157 172Right-handed alpha
Helix 14
AB5
A
172 194Right-handed alpha
Helix 15
AB6
A
198 205Right-handed alpha
Helix 16
AB7
A
206 208Right-handed 310
Helix 17
AB8
A
218 233Right-handed alpha
Helix 18
AB9
A
233 252Right-handed alpha
Helix 19
AC1
A
253 256Right-handed 310
Helix 20
AC2
A
265 267Right-handed 310
Helix 21
AC3
A
275 277Right-handed 310
Helix 22
AC4
A
278 283Right-handed alpha
Helix 23
AC5
A
293 300Right-handed alpha
Helix 24
AC6
A
303 318Right-handed alpha
Helix 25
AC7
A
324 331Right-handed alpha
Helix 26
AC8
A
365 385Right-handed alpha
Helix 27
AC9
A
389 393Right-handed 310
Helix 28
AD1
A
399 413Right-handed alpha
Helix 29
AD2
A
414 421Right-handed alpha
Helix 30
AD3
A
431 465Right-handed alpha
Helix 31
AD4
A
469 471Right-handed 310
Helix 32
AD5
A
472 484Right-handed alpha
Helix 33
AD6
A
498 502Right-handed 310
Helix 34
AD7
A
503 508Right-handed alpha
Helix 35
AD8
A
513 533Right-handed alpha
Helix 36
AD9
A
538 542Right-handed 310
Helix 37
AE1
A
547 560Right-handed alpha
Helix 38
AE2
A
565 575Right-handed alpha
Helix 39
AE3
A
581 599Right-handed alpha
Helix 40
AE4
A
600 602Right-handed 310
Helix 41
AE5
E
337 343Right-handed alpha
Helix 42
AE6
E
349 353Right-handed 310
Helix 43
AE7
E
365 370Right-handed alpha
Helix 44
AE8
E
383 387Right-handed 310
Helix 45
AE9
E
405 410Right-handed 310
Helix 46
AF1
E
416 422Right-handed alpha
Helix 47
AF2
E
438 443Right-handed alpha
Helix 48
AF3
E
502 505Right-handed 310
Helix 49
AF4
F
20 53Right-handed alpha
Helix 50
AF5
F
55 81Right-handed alpha
Helix 51
AF6
F
82 83Right-handed 310
Helix 52
AF7
F
84 88Right-handed 310
Helix 53
AF8
F
90 102Right-handed alpha
Helix 54
AF9
F
109 130Right-handed alpha
Helix 55
AG1
F
146 155Right-handed alpha
Helix 56
AG2
F
157 172Right-handed alpha
Helix 57
AG3
F
172 194Right-handed alpha
Helix 58
AG4
F
198 205Right-handed alpha
Helix 59
AG5
F
206 208Right-handed 310
Helix 60
AG6
F
218 252Right-handed alpha
Helix 61
AG7
F
253 256Right-handed 310
Helix 62
AG8
F
265 267Right-handed 310
Helix 63
AG9
F
275 277Right-handed 310
Helix 64
AH1
F
278 283Right-handed alpha
Helix 65
AH2
F
293 300Right-handed alpha
Helix 66
AH3
F
303 318Right-handed alpha
Helix 67
AH4
F
324 330Right-handed alpha
Helix 68
AH5
F
365 385Right-handed alpha
Helix 69
AH6
F
389 393Right-handed 310
Helix 70
AH7
F
397 414Right-handed alpha
Helix 71
AH8
F
414 420Right-handed alpha
Helix 72
AH9
F
431 447Right-handed alpha
Helix 73
AI1
F
448 465Right-handed alpha
Helix 74
AI2
F
469 471Right-handed 310
Helix 75
AI3
F
472 484Right-handed alpha
Helix 76
AI4
F
499 502Right-handed 310
Helix 77
AI5
F
503 508Right-handed alpha
Helix 78
AI6
F
513 533Right-handed alpha
Helix 79
AI7
F
538 542Right-handed 310
Helix 80
AI8
F
548 559Right-handed alpha
Helix 81
AI9
F
565 575Right-handed alpha
Helix 82
AJ1
F
581 599Right-handed alpha
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There are 14 sheets in PDB entry 8Z9I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
354 358first strand
Strand 2
O
395 403anti-parallel
Strand 3
O
507 514anti-parallel
Strand 4
O
431 437anti-parallel
Strand 5
O
376 380anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
361 363first strand
Strand 2
O
524 526parallel
Strand 3
O
391 392anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
452 454first strand
Strand 2
O
492 494anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
473 474first strand
Strand 2
O
488 489anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 134first strand
Strand 2
A
137 143anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 263first strand
Strand 2
A
487 488parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
347 352first strand
Strand 2
A
355 359anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
354 358first strand
Strand 2
E
395 403anti-parallel
Strand 3
E
507 515anti-parallel
Strand 4
E
431 437anti-parallel
Strand 5
E
376 380anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
361 363first strand
Strand 2
E
524 526parallel
Strand 3
E
391 392anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
452 454first strand
Strand 2
E
492 494anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
473 474first strand
Strand 2
E
488 489anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
131 134first strand
Strand 2
F
137 143anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
262 263first strand
Strand 2
F
487 488parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
347 352first strand
Strand 2
F
355 359anti-parallel
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