Analysis of interatomic Contacts of Structural Units in PDB entry:
8Z9Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8Z9Y entry

There are 6 chains in PDB entry 8Z9Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 15PRO 1786
B
 PHE 111ASP 274
C
 ASN 7PRO 98
D
 PHE 108GLY 562
E
 PRO 64SER 456
F
 GLY 158ILE 252
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 95 helices in PDB entry 8Z9Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 33Right-handed alpha
Helix 2
AA2
A
34 37Right-handed 310
Helix 3
AA3
A
39 41Right-handed 310
Helix 4
AA4
A
42 51Right-handed alpha
Helix 5
AA5
A
55 78Right-handed alpha
Helix 6
AA6
A
81 88Right-handed alpha
Helix 7
AA7
A
90 110Right-handed alpha
Helix 8
AA8
A
126 141Right-handed alpha
Helix 9
AA9
A
142 144Right-handed 310
Helix 10
AB1
A
151 164Right-handed alpha
Helix 11
AB2
A
166 196Right-handed alpha
Helix 12
AB3
A
217 241Right-handed alpha
Helix 13
AB4
A
402 414Right-handed alpha
Helix 14
AB5
A
430 456Right-handed alpha
Helix 15
AB6
A
460 465Right-handed alpha
Helix 16
AB7
A
522 528Right-handed alpha
Helix 17
AB8
A
615 618Right-handed 310
Helix 18
AB9
A
707 712Right-handed alpha
Helix 19
AC1
A
1127 1141Right-handed alpha
Helix 20
AC2
A
1152 1162Right-handed alpha
Helix 21
AC3
A
1169 1179Right-handed alpha
Helix 22
AC4
A
1188 1198Right-handed alpha
Helix 23
AC5
A
1215 1221Right-handed alpha
Helix 24
AC6
A
1232 1248Right-handed alpha
Helix 25
AC7
A
1286 1304Right-handed alpha
Helix 26
AC8
A
1420 1422Right-handed 310
Helix 27
AC9
A
1423 1433Right-handed alpha
Helix 28
AD1
A
1438 1443Right-handed alpha
Helix 29
AD2
A
1534 1541Right-handed alpha
Helix 30
AD3
A
1542 1544Right-handed 310
Helix 31
AD4
A
1622 1637Right-handed alpha
Helix 32
AD5
A
1681 1685Right-handed 310
Helix 33
AD6
A
1687 1701Right-handed alpha
Helix 34
AD7
A
1736 1745Right-handed alpha
Helix 35
AD8
A
1749 1763Right-handed alpha
Helix 36
AD9
A
1772 1777Right-handed alpha
Helix 37
AE1
B
121 128Right-handed alpha
Helix 38
AE2
B
129 131Right-handed 310
Helix 39
AE3
B
132 138Right-handed alpha
Helix 40
AE4
B
143 150Right-handed 310
Helix 41
AE5
B
151 167Right-handed alpha
Helix 42
AE6
B
171 184Right-handed alpha
Helix 43
AE7
B
193 205Right-handed alpha
Helix 44
AE8
B
205 220Right-handed alpha
Helix 45
AE9
B
221 226Right-handed alpha
Helix 46
AF1
B
229 254Right-handed alpha
Helix 47
AF2
B
263 270Right-handed alpha
Helix 48
AF3
C
20 40Right-handed alpha
Helix 49
AF4
C
42 46Right-handed 310
Helix 50
AF5
C
51 71Right-handed alpha
Helix 51
AF6
C
77 81Right-handed 310
Helix 52
AF7
C
82 97Right-handed alpha
Helix 53
AF8
D
108 113Right-handed 310
Helix 54
AF9
D
149 163Right-handed alpha
Helix 55
AG1
D
191 200Right-handed alpha
Helix 56
AG2
D
237 239Right-handed 310
Helix 57
AG3
D
271 280Right-handed alpha
Helix 58
AG4
D
284 289Right-handed 310
Helix 59
AG5
D
290 309Right-handed alpha
Helix 60
AG6
D
315 318Right-handed 310
Helix 61
AG7
D
319 327Right-handed alpha
Helix 62
AG8
D
376 395Right-handed alpha
Helix 63
AG9
D
396 398Right-handed 310
Helix 64
AH1
D
403 409Right-handed alpha
Helix 65
AH2
D
425 429Right-handed 310
Helix 66
AH3
D
431 437Right-handed 310
Helix 67
AH4
D
440 442Right-handed 310
Helix 68
AH5
D
443 463Right-handed alpha
Helix 69
AH6
D
464 467Right-handed 310
Helix 70
AH7
D
470 481Right-handed alpha
Helix 71
AH8
D
556 562Right-handed alpha
Helix 72
AH9
E
65 81Right-handed alpha
Helix 73
AI1
E
87 95Right-handed alpha
Helix 74
AI2
E
106 122Right-handed alpha
Helix 75
AI3
E
124 147Right-handed alpha
Helix 76
AI4
E
153 155Right-handed 310
Helix 77
AI5
E
156 163Right-handed alpha
Helix 78
AI6
E
181 201Right-handed alpha
Helix 79
AI7
E
215 221Right-handed alpha
Helix 80
AI8
E
221 235Right-handed alpha
Helix 81
AI9
E
253 263Right-handed alpha
Helix 82
AJ1
E
288 294Right-handed alpha
Helix 83
AJ2
E
295 314Right-handed alpha
Helix 84
AJ3
E
328 350Right-handed alpha
Helix 85
AJ4
E
360 365Right-handed 310
Helix 86
AJ5
E
369 371Right-handed 310
Helix 87
AJ6
E
372 378Right-handed alpha
Helix 88
AJ7
E
388 399Right-handed alpha
Helix 89
AJ8
E
403 418Right-handed alpha
Helix 90
AJ9
E
435 455Right-handed alpha
Helix 91
AK1
F
159 179Right-handed alpha
Helix 92
AK2
F
180 195Right-handed alpha
Helix 93
AK3
F
199 226Right-handed alpha
Helix 94
AK4
F
229 237Right-handed alpha
Helix 95
AK5
F
244 251Right-handed alpha
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There are 7 sheets in PDB entry 8Z9Y. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
387 390first strand
Strand 2
A
395 398anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
479 480first strand
Strand 2
A
469 474anti-parallel
Strand 3
D
264 267parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
612 613first strand
Strand 2
A
631 632parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1546 1550first strand
Strand 2
A
1611 1615anti-parallel
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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
207 212first strand
Strand 2
D
218 224anti-parallel
Strand 3
D
227 236anti-parallel
Strand 4
D
241 247anti-parallel
Strand 5
D
252 261anti-parallel
Strand 6
D
334 342anti-parallel
Strand 7
D
345 354anti-parallel
Strand 8
D
358 364anti-parallel
Strand 9
D
367 368anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
487 490first strand
Strand 2
D
511 514anti-parallel
Strand 3
D
519 525anti-parallel
Strand 4
D
531 536anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
248 252first strand
Strand 2
E
239 242anti-parallel
Strand 3
E
271 273anti-parallel
Strand 4
E
281 282anti-parallel
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