Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZAW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZAW entry

There is 1 chain in PDB entry 8ZAW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2ALA 562
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 15 helices in PDB entry 8ZAW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
86 98Right-handed alpha
Helix 2
AA2
A
99 101Right-handed 310
Helix 3
AA3
A
124 139Right-handed alpha
Helix 4
AA4
A
164 171Right-handed alpha
Helix 5
AA5
A
195 215Right-handed alpha
Helix 6
AA6
A
217 225Right-handed alpha
Helix 7
AA7
A
240 258Right-handed alpha
Helix 8
AA8
A
262 284Right-handed alpha
Helix 9
AA9
A
288 296Right-handed alpha
Helix 10
AB1
A
299 319Right-handed alpha
Helix 11
AB2
A
415 422Right-handed alpha
Helix 12
AB3
A
423 425Right-handed 310
Helix 13
AB4
A
447 463Right-handed alpha
Helix 14
AB5
A
492 498Right-handed alpha
Helix 15
AB6
A
525 548Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 8ZAW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 8first strand
Strand 2
A
15 19anti-parallel
Strand 3
A
28 34anti-parallel
Strand 4
A
37 46anti-parallel
Strand 5
A
108 117anti-parallel
Strand 6
A
57 63parallel
Back to list of sheets
Back to top of page

There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 161first strand
Strand 2
A
148 155anti-parallel
Strand 3
A
173 180anti-parallel
Strand 4
A
183 194anti-parallel
Strand 5
A
512 519anti-parallel
Strand 6
A
501 507anti-parallel
Strand 7
A
472 481anti-parallel
Strand 8
A
484 489anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
335 339first strand
Strand 2
A
348 354anti-parallel
Strand 3
A
357 365anti-parallel
Strand 4
A
435 443anti-parallel
Strand 5
A
387 390parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il