Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZAX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZAX entry

There are 2 chains in PDB entry 8ZAX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2GLN 247
B
 GLY 2GLN 247
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 23 helices in PDB entry 8ZAX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 29Right-handed alpha
Helix 2
AA2
A
40 52Right-handed alpha
Helix 3
AA3
A
64 79Right-handed alpha
Helix 4
AA4
A
101 113Right-handed alpha
Helix 5
AA5
A
113 128Right-handed alpha
Helix 6
AA6
A
139 143Right-handed 310
Helix 7
AA7
A
149 173Right-handed alpha
Helix 8
AA8
A
189 194Right-handed alpha
Helix 9
AA9
A
196 205Right-handed alpha
Helix 10
AB1
A
214 227Right-handed alpha
Helix 11
AB2
A
228 231Right-handed 310
Helix 12
AB3
A
243 247Right-handed 310
Helix 13
AB4
B
16 28Right-handed alpha
Helix 14
AB5
B
40 52Right-handed alpha
Helix 15
AB6
B
64 79Right-handed alpha
Helix 16
AB7
B
101 113Right-handed alpha
Helix 17
AB8
B
113 128Right-handed alpha
Helix 18
AB9
B
139 143Right-handed 310
Helix 19
AC1
B
149 173Right-handed alpha
Helix 20
AC2
B
189 194Right-handed alpha
Helix 21
AC3
B
196 205Right-handed alpha
Helix 22
AC4
B
214 227Right-handed alpha
Helix 23
AC5
B
228 231Right-handed 310
Back to top of page

There are 2 sheets in PDB entry 8ZAX. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 59first strand
Strand 2
A
33 38parallel
Strand 3
A
8 11parallel
Strand 4
A
84 87parallel
Strand 5
A
132 137parallel
Strand 6
A
177 184parallel
Strand 7
A
237 240parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
55 59first strand
Strand 2
B
33 38parallel
Strand 3
B
8 11parallel
Strand 4
B
84 87parallel
Strand 5
B
132 137parallel
Strand 6
B
177 184parallel
Strand 7
B
237 240parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il