Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZAZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8ZAZ entry

There are 4 chains in PDB entry 8ZAZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	TYR 22	ALA 382
B	TYR 22	ALA 382
C	TYR 22	ALA 382
D	TYR 22	ALA 382

There are 66 helices in PDB entry 8ZAZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	31	35	Right-handed 310
Helix 2	AA2	A	36	40	Right-handed 310
Helix 3	AA3	A	42	46	Right-handed 310
Helix 4	AA4	A	72	83	Right-handed alpha
Helix 5	AA5	A	102	112	Right-handed alpha
Helix 6	AA6	A	112	130	Right-handed alpha
Helix 7	AA7	A	143	145	Right-handed 310
Helix 8	AA8	A	146	166	Right-handed alpha
Helix 9	AA9	A	181	189	Right-handed alpha
Helix 10	AB1	A	190	198	Right-handed alpha
Helix 11	AB2	A	226	230	Right-handed 310
Helix 12	AB3	A	236	247	Right-handed alpha
Helix 13	AB4	A	250	252	Right-handed 310
Helix 14	AB5	A	296	304	Right-handed alpha
Helix 15	AB6	A	330	344	Right-handed alpha
Helix 16	AB7	A	354	357	Right-handed 310
Helix 17	AB8	A	370	382	Right-handed alpha
Helix 18	AB9	B	31	35	Right-handed 310
Helix 19	AC1	B	36	40	Right-handed 310
Helix 20	AC2	B	42	46	Right-handed 310
Helix 21	AC3	B	72	83	Right-handed alpha
Helix 22	AC4	B	102	112	Right-handed alpha
Helix 23	AC5	B	112	130	Right-handed alpha
Helix 24	AC6	B	143	145	Right-handed 310
Helix 25	AC7	B	146	166	Right-handed alpha
Helix 26	AC8	B	181	189	Right-handed alpha
Helix 27	AC9	B	190	198	Right-handed alpha
Helix 28	AD1	B	226	230	Right-handed 310
Helix 29	AD2	B	236	248	Right-handed alpha
Helix 30	AD3	B	250	252	Right-handed 310
Helix 31	AD4	B	296	303	Right-handed alpha
Helix 32	AD5	B	330	344	Right-handed alpha
Helix 33	AD6	B	353	357	Right-handed 310
Helix 34	AD7	B	370	382	Right-handed alpha
Helix 35	AD8	C	31	33	Right-handed 310
Helix 36	AD9	C	36	40	Right-handed 310
Helix 37	AE1	C	42	46	Right-handed 310
Helix 38	AE2	C	72	83	Right-handed alpha
Helix 39	AE3	C	84	86	Right-handed 310
Helix 40	AE4	C	102	112	Right-handed alpha
Helix 41	AE5	C	112	131	Right-handed alpha
Helix 42	AE6	C	143	145	Right-handed 310
Helix 43	AE7	C	146	165	Right-handed alpha
Helix 44	AE8	C	181	189	Right-handed alpha
Helix 45	AE9	C	190	198	Right-handed alpha
Helix 46	AF1	C	236	247	Right-handed alpha
Helix 47	AF2	C	250	252	Right-handed 310
Helix 48	AF3	C	296	304	Right-handed alpha
Helix 49	AF4	C	330	344	Right-handed alpha
Helix 50	AF5	C	353	357	Right-handed 310
Helix 51	AF6	C	370	382	Right-handed alpha
Helix 52	AF7	D	31	35	Right-handed 310
Helix 53	AF8	D	36	40	Right-handed 310
Helix 54	AF9	D	72	83	Right-handed alpha
Helix 55	AG1	D	102	112	Right-handed alpha
Helix 56	AG2	D	112	131	Right-handed alpha
Helix 57	AG3	D	146	164	Right-handed alpha
Helix 58	AG4	D	181	189	Right-handed alpha
Helix 59	AG5	D	190	198	Right-handed alpha
Helix 60	AG6	D	226	230	Right-handed 310
Helix 61	AG7	D	236	247	Right-handed alpha
Helix 62	AG8	D	250	252	Right-handed 310
Helix 63	AG9	D	296	304	Right-handed alpha
Helix 64	AH1	D	330	344	Right-handed alpha
Helix 65	AH2	D	353	357	Right-handed 310
Helix 66	AH3	D	370	382	Right-handed alpha

There are 12 sheets in PDB entry 8ZAZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	65	67	first strand
Strand 2	A	53	62	anti-parallel
Strand 3	A	91	97	parallel
Strand 4	A	134	138	parallel
Strand 5	A	173	179	parallel
Strand 6	A	200	204	parallel
Strand 7	A	254	259	parallel
Strand 8	A	348	352	parallel
Strand 9	A	23	29	parallel
Strand 10	A	53	62	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	278	281	first strand
Strand 2	A	261	267	anti-parallel
Strand 3	A	293	295	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	278	281	first strand
Strand 2	A	261	267	anti-parallel
Strand 3	A	324	327	anti-parallel
Strand 4	A	316	321	anti-parallel
Strand 5	A	307	311	anti-parallel

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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	65	67	first strand
Strand 2	B	53	62	anti-parallel
Strand 3	B	91	97	parallel
Strand 4	B	134	138	parallel
Strand 5	B	173	179	parallel
Strand 6	B	200	204	parallel
Strand 7	B	254	259	parallel
Strand 8	B	348	352	parallel
Strand 9	B	23	29	parallel
Strand 10	B	53	62	parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	278	281	first strand
Strand 2	B	261	267	anti-parallel
Strand 3	B	293	295	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	278	281	first strand
Strand 2	B	261	267	anti-parallel
Strand 3	B	324	327	anti-parallel
Strand 4	B	316	321	anti-parallel
Strand 5	B	307	311	anti-parallel

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There are 10 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	65	67	first strand
Strand 2	C	53	62	anti-parallel
Strand 3	C	91	97	parallel
Strand 4	C	134	138	parallel
Strand 5	C	173	179	parallel
Strand 6	C	200	204	parallel
Strand 7	C	254	259	parallel
Strand 8	C	348	352	parallel
Strand 9	C	23	29	parallel
Strand 10	C	53	62	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	278	281	first strand
Strand 2	C	261	267	anti-parallel
Strand 3	C	293	295	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	278	281	first strand
Strand 2	C	261	267	anti-parallel
Strand 3	C	324	327	anti-parallel
Strand 4	C	316	321	anti-parallel
Strand 5	C	307	311	anti-parallel

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There are 10 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	65	67	first strand
Strand 2	D	53	62	anti-parallel
Strand 3	D	91	97	parallel
Strand 4	D	134	138	parallel
Strand 5	D	173	179	parallel
Strand 6	D	200	204	parallel
Strand 7	D	254	259	parallel
Strand 8	D	348	352	parallel
Strand 9	D	23	29	parallel
Strand 10	D	53	62	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	278	281	first strand
Strand 2	D	261	267	anti-parallel
Strand 3	D	294	295	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	278	281	first strand
Strand 2	D	261	267	anti-parallel
Strand 3	D	324	327	anti-parallel
Strand 4	D	316	321	anti-parallel
Strand 5	D	307	311	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8ZAZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZAZ