Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZB0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZB0 entry

There are 2 chains in PDB entry 8ZB0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 7CYS 441
B
 ASN 7CYS 441
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 8ZB0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 32Right-handed alpha
Helix 2
AA2
A
43 47Right-handed 310
Helix 3
AA3
A
48 57Right-handed alpha
Helix 4
AA4
A
76 106Right-handed alpha
Helix 5
AA5
A
112 133Right-handed alpha
Helix 6
AA6
A
243 268Right-handed alpha
Helix 7
AA7
A
291 299Right-handed alpha
Helix 8
AA8
A
317 344Right-handed alpha
Helix 9
AA9
A
352 363Right-handed alpha
Helix 10
AB1
A
395 409Right-handed alpha
Helix 11
AB2
B
8 32Right-handed alpha
Helix 12
AB3
B
43 47Right-handed 310
Helix 13
AB4
B
48 57Right-handed alpha
Helix 14
AB5
B
76 106Right-handed alpha
Helix 15
AB6
B
112 133Right-handed alpha
Helix 16
AB7
B
243 268Right-handed alpha
Helix 17
AB8
B
291 299Right-handed alpha
Helix 18
AB9
B
317 344Right-handed alpha
Helix 19
AC1
B
352 363Right-handed alpha
Helix 20
AC2
B
395 409Right-handed alpha
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There are 2 sheets in PDB entry 8ZB0. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
374 376first strand
Strand 2
A
382 388anti-parallel
Strand 3
A
414 419parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
374 376first strand
Strand 2
B
382 388anti-parallel
Strand 3
B
414 419parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il