Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZBV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZBV entry

There is 1 chain in PDB entry 8ZBV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 62ARG 840
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 8ZBV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
73 77Right-handed 310
Helix 2
AA2
A
115 120Right-handed 310
Helix 3
AA3
A
121 131Right-handed alpha
Helix 4
AA4
A
133 142Right-handed alpha
Helix 5
AA5
A
315 319Right-handed 310
Helix 6
AA6
A
322 335Right-handed alpha
Helix 7
AA7
A
338 355Right-handed alpha
Helix 8
AA8
A
370 382Right-handed alpha
Helix 9
AA9
A
383 400Right-handed alpha
Helix 10
AB1
A
421 426Right-handed 310
Helix 11
AB2
A
438 443Right-handed alpha
Helix 12
AB3
A
445 458Right-handed alpha
Helix 13
AB4
A
458 471Right-handed alpha
Helix 14
AB5
A
503 520Right-handed alpha
Helix 15
AB6
A
521 528Right-handed alpha
Helix 16
AB7
A
528 543Right-handed alpha
Helix 17
AB8
A
578 600Right-handed alpha
Helix 18
AB9
A
602 614Right-handed alpha
Helix 19
AC1
A
644 650Right-handed 310
Helix 20
AC2
A
661 676Right-handed alpha
Helix 21
AC3
A
691 705Right-handed alpha
Helix 22
AC4
A
707 719Right-handed alpha
Helix 23
AC5
A
747 762Right-handed alpha
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There are 8 sheets in PDB entry 8ZBV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 67first strand
Strand 2
A
168 176anti-parallel
Strand 3
A
181 188anti-parallel
Strand 4
A
191 200anti-parallel
Strand 5
A
205 212anti-parallel
Strand 6
A
298 307anti-parallel
Strand 7
A
271 280anti-parallel
Strand 8
A
238 243anti-parallel
Strand 9
A
231 235anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 81first strand
Strand 2
A
85 89anti-parallel
Strand 3
A
96 102anti-parallel
Strand 4
A
156 162anti-parallel
Strand 5
A
218 225anti-parallel
Strand 6
A
290 296anti-parallel
Strand 7
A
283 287anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 249first strand
Strand 2
A
260 261anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
358 360first strand
Strand 2
A
783 789anti-parallel
Strand 3
A
795 801anti-parallel
Strand 4
A
804 810anti-parallel
Strand 5
A
836 839anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
427 428first strand
Strand 2
A
481 482anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
544 546first strand
Strand 2
A
552 554anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
565 566first strand
Strand 2
A
571 572anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
763 764first strand
Strand 2
A
770 772anti-parallel
Strand 3
A
818 822parallel
Strand 4
A
825 829anti-parallel
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