Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZC1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZC1 entry

There are 3 chains in PDB entry 8ZC1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 VAL 341PHE 515
C
 PRO 2GLU 221
E
 VAL 2SER 229
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 8ZC1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
383 388Right-handed alpha
Helix 2
AA2
B
405 410Right-handed 310
Helix 3
AA3
B
417 422Right-handed alpha
Helix 4
AA4
C
133 137Right-handed 310
Helix 5
AA5
C
192 199Right-handed alpha
Helix 6
AA6
E
87 91Right-handed 310
Helix 7
AA7
E
108 112Right-handed 310
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There are 15 sheets in PDB entry 8ZC1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
354 356first strand
Strand 2
B
397 403anti-parallel
Strand 3
B
507 513anti-parallel
Strand 4
B
432 436anti-parallel
Strand 5
B
376 378anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
452 454first strand
Strand 2
B
492 494anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
9 12first strand
Strand 2
C
105 109parallel
Strand 3
C
86 93anti-parallel
Strand 4
C
34 39anti-parallel
Strand 5
C
46 49anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
9 12first strand
Strand 2
C
105 109parallel
Strand 3
C
86 93anti-parallel
Strand 4
C
98 100anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
18 23first strand
Strand 2
C
71 76anti-parallel
Strand 3
C
63 67anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
125 129first strand
Strand 2
C
144 150anti-parallel
Strand 3
C
183 191anti-parallel
Strand 4
C
170 172anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
141 142first strand
Strand 2
C
183 191anti-parallel
Strand 3
C
176 177anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
164 166first strand
Strand 2
C
156 161anti-parallel
Strand 3
C
202 208anti-parallel
Strand 4
C
211 212anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
164 166first strand
Strand 2
C
156 161anti-parallel
Strand 3
C
202 208anti-parallel
Strand 4
C
215 217anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
3 6first strand
Strand 2
E
20 25anti-parallel
Strand 3
E
78 82anti-parallel
Strand 4
E
69 73anti-parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
58 60first strand
Strand 2
E
46 51anti-parallel
Strand 3
E
34 39anti-parallel
Strand 4
E
93 99anti-parallel
Strand 5
E
114 117anti-parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
58 60first strand
Strand 2
E
46 51anti-parallel
Strand 3
E
34 39anti-parallel
Strand 4
E
93 99anti-parallel
Strand 5
E
121 122anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
134 137first strand
Strand 2
E
150 157anti-parallel
Strand 3
E
190 198anti-parallel
Strand 4
E
178 179anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
134 137first strand
Strand 2
E
150 157anti-parallel
Strand 3
E
190 198anti-parallel
Strand 4
E
183 184anti-parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
166 168first strand
Strand 2
E
209 212anti-parallel
Strand 3
E
222 224anti-parallel
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