Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZC5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZC5 entry

There are 6 chains in PDB entry 8ZC5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 332PRO 527
B
 PHE 338PHE 515
C
 PRO 2LEU 110
D
 PRO 2LEU 110
E
 VAL 2VAL 125
F
 VAL 2VAL 125
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 8ZC5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
337 343Right-handed alpha
Helix 2
AA2
A
403 407Right-handed 310
Helix 3
AA3
A
416 422Right-handed alpha
Helix 4
AA4
A
502 506Right-handed 310
Helix 5
AA5
B
339 343Right-handed alpha
Helix 6
AA6
B
405 410Right-handed 310
Helix 7
AA7
B
502 505Right-handed 310
Helix 8
AA8
D
80 84Right-handed 310
Helix 9
AA9
E
28 32Right-handed 310
Helix 10
AB1
E
61 65Right-handed 310
Helix 11
AB2
E
87 91Right-handed 310
Helix 12
AB3
E
108 112Right-handed 310
Helix 13
AB4
F
87 91Right-handed 310
Helix 14
AB5
F
108 112Right-handed 310
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There are 18 sheets in PDB entry 8ZC5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
354 358first strand
Strand 2
A
395 402anti-parallel
Strand 3
A
508 514anti-parallel
Strand 4
A
431 437anti-parallel
Strand 5
A
376 380anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
452 454first strand
Strand 2
A
492 494anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
473 474first strand
Strand 2
A
488 489anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
354 358first strand
Strand 2
B
395 403anti-parallel
Strand 3
B
507 514anti-parallel
Strand 4
B
432 436anti-parallel
Strand 5
B
374 377anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
452 454first strand
Strand 2
B
492 494anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
473 474first strand
Strand 2
B
488 489anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
9 12first strand
Strand 2
C
105 109parallel
Strand 3
C
86 93anti-parallel
Strand 4
C
34 39anti-parallel
Strand 5
C
46 49anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
9 12first strand
Strand 2
C
105 109parallel
Strand 3
C
86 93anti-parallel
Strand 4
C
98 100anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
17 23first strand
Strand 2
C
71 77anti-parallel
Strand 3
C
63 67anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
9 10first strand
Strand 2
D
106 107parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
17 22first strand
Strand 2
D
72 77anti-parallel
Strand 3
D
64 67anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
45 49first strand
Strand 2
D
34 39anti-parallel
Strand 3
D
86 93anti-parallel
Strand 4
D
98 101anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
3 6first strand
Strand 2
E
20 25anti-parallel
Strand 3
E
78 83anti-parallel
Strand 4
E
68 73anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
45 47first strand
Strand 2
E
34 39anti-parallel
Strand 3
E
92 99anti-parallel
Strand 4
E
114 117anti-parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
45 47first strand
Strand 2
E
34 39anti-parallel
Strand 3
E
92 99anti-parallel
Strand 4
E
121 123anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
4 6first strand
Strand 2
F
18 24anti-parallel
Strand 3
F
78 83anti-parallel
Strand 4
F
68 71anti-parallel
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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
58 59first strand
Strand 2
F
45 51anti-parallel
Strand 3
F
33 39anti-parallel
Strand 4
F
92 99anti-parallel
Strand 5
F
114 116anti-parallel
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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
58 59first strand
Strand 2
F
45 51anti-parallel
Strand 3
F
33 39anti-parallel
Strand 4
F
92 99anti-parallel
Strand 5
F
121 123anti-parallel
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