Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZC9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8ZC9 entry

There are 6 chains in PDB entry 8ZC9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	GLU 7	ILE 1005
A	LEU 6	ILE 1005
C	MET 1	ARG 239
E	GLU 7	ILE 1005
D	LEU 6	ILE 1005
F	MET 1	ARG 239

There are233 helices in PDB entry 8ZC9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	9	21	Right-handed alpha
Helix 2	AA2	B	23	40	Right-handed alpha
Helix 3	AA3	B	51	55	Right-handed 310
Helix 4	AA4	B	58	72	Right-handed alpha
Helix 5	AA5	B	82	109	Right-handed alpha
Helix 6	AA6	B	115	124	Right-handed alpha
Helix 7	AA7	B	136	144	Right-handed alpha
Helix 8	AA8	B	154	160	Right-handed alpha
Helix 9	AA9	B	179	183	Right-handed 310
Helix 10	AB1	B	186	192	Right-handed alpha
Helix 11	AB2	B	192	197	Right-handed alpha
Helix 12	AB3	B	197	211	Right-handed alpha
Helix 13	AB4	B	222	232	Right-handed alpha
Helix 14	AB5	B	254	263	Right-handed alpha
Helix 15	AB6	B	281	298	Right-handed alpha
Helix 16	AB7	B	304	317	Right-handed alpha
Helix 17	AB8	B	318	321	Right-handed 310
Helix 18	AB9	B	326	334	Right-handed alpha
Helix 19	AC1	B	355	365	Right-handed alpha
Helix 20	AC2	B	374	392	Right-handed alpha
Helix 21	AC3	B	411	416	Right-handed alpha
Helix 22	AC4	B	417	426	Right-handed alpha
Helix 23	AC5	B	432	446	Right-handed alpha
Helix 24	AC6	B	447	462	Right-handed alpha
Helix 25	AC7	B	467	493	Right-handed alpha
Helix 26	AC8	B	494	501	Right-handed alpha
Helix 27	AC9	B	508	519	Right-handed alpha
Helix 28	AD1	B	523	531	Right-handed 310
Helix 29	AD2	B	532	539	Right-handed alpha
Helix 30	AD3	B	540	545	Right-handed 310
Helix 31	AD4	B	554	563	Right-handed alpha
Helix 32	AD5	B	579	598	Right-handed alpha
Helix 33	AD6	B	600	604	Right-handed 310
Helix 34	AD7	B	605	629	Right-handed alpha
Helix 35	AD8	B	648	659	Right-handed alpha
Helix 36	AD9	B	660	671	Right-handed alpha
Helix 37	AE1	B	672	676	Right-handed 310
Helix 38	AE2	B	682	701	Right-handed alpha
Helix 39	AE3	B	705	711	Right-handed alpha
Helix 40	AE4	B	712	723	Right-handed alpha
Helix 41	AE5	B	724	726	Right-handed 310
Helix 42	AE6	B	729	741	Right-handed alpha
Helix 43	AE7	B	750	765	Right-handed alpha
Helix 44	AE8	B	771	786	Right-handed alpha
Helix 45	AE9	B	800	812	Right-handed alpha
Helix 46	AF1	B	818	825	Right-handed alpha
Helix 47	AF2	B	831	841	Right-handed alpha
Helix 48	AF3	B	842	845	Right-handed 310
Helix 49	AF4	B	846	857	Right-handed alpha
Helix 50	AF5	B	861	872	Right-handed alpha
Helix 51	AF6	B	878	900	Right-handed alpha
Helix 52	AF7	B	911	922	Right-handed alpha
Helix 53	AF8	B	927	932	Right-handed 310
Helix 54	AF9	B	937	945	Right-handed alpha
Helix 55	AG1	B	946	949	Right-handed 310
Helix 56	AG2	B	955	961	Right-handed 310
Helix 57	AG3	B	963	973	Right-handed alpha
Helix 58	AG4	B	973	991	Right-handed alpha
Helix 59	AG5	B	993	1002	Right-handed alpha
Helix 60	AG6	A	7	21	Right-handed alpha
Helix 61	AG7	A	26	39	Right-handed alpha
Helix 62	AG8	A	48	52	Right-handed 310
Helix 63	AG9	A	59	71	Right-handed alpha
Helix 64	AH1	A	82	96	Right-handed alpha
Helix 65	AH2	A	97	109	Right-handed alpha
Helix 66	AH3	A	115	124	Right-handed alpha
Helix 67	AH4	A	136	145	Right-handed alpha
Helix 68	AH5	A	187	192	Right-handed alpha
Helix 69	AH6	A	192	197	Right-handed alpha
Helix 70	AH7	A	197	210	Right-handed alpha
Helix 71	AH8	A	222	233	Right-handed alpha
Helix 72	AH9	A	254	264	Right-handed alpha
Helix 73	AI1	A	281	298	Right-handed alpha
Helix 74	AI2	A	304	317	Right-handed alpha
Helix 75	AI3	A	318	321	Right-handed 310
Helix 76	AI4	A	326	334	Right-handed alpha
Helix 77	AI5	A	357	366	Right-handed alpha
Helix 78	AI6	A	366	372	Right-handed alpha
Helix 79	AI7	A	374	392	Right-handed alpha
Helix 80	AI8	A	411	416	Right-handed alpha
Helix 81	AI9	A	417	427	Right-handed alpha
Helix 82	AJ1	A	431	446	Right-handed alpha
Helix 83	AJ2	A	447	461	Right-handed alpha
Helix 84	AJ3	A	467	493	Right-handed alpha
Helix 85	AJ4	A	495	500	Right-handed alpha
Helix 86	AJ5	A	508	519	Right-handed alpha
Helix 87	AJ6	A	523	527	Right-handed 310
Helix 88	AJ7	A	532	539	Right-handed alpha
Helix 89	AJ8	A	540	545	Right-handed 310
Helix 90	AJ9	A	552	569	Right-handed alpha
Helix 91	AK1	A	579	598	Right-handed alpha
Helix 92	AK2	A	600	604	Right-handed 310
Helix 93	AK3	A	605	628	Right-handed alpha
Helix 94	AK4	A	634	639	Right-handed alpha
Helix 95	AK5	A	648	659	Right-handed alpha
Helix 96	AK6	A	660	671	Right-handed alpha
Helix 97	AK7	A	680	702	Right-handed alpha
Helix 98	AK8	A	705	723	Right-handed alpha
Helix 99	AK9	A	724	726	Right-handed 310
Helix 100	AL1	A	732	741	Right-handed alpha
Helix 101	AL2	A	750	765	Right-handed alpha
Helix 102	AL3	A	768	786	Right-handed alpha
Helix 103	AL4	A	801	812	Right-handed alpha
Helix 104	AL5	A	817	822	Right-handed alpha
Helix 105	AL6	A	833	841	Right-handed alpha
Helix 106	AL7	A	842	845	Right-handed 310
Helix 107	AL8	A	846	857	Right-handed alpha
Helix 108	AL9	A	862	872	Right-handed alpha
Helix 109	AM1	A	878	901	Right-handed alpha
Helix 110	AM2	A	912	922	Right-handed alpha
Helix 111	AM3	A	928	932	Right-handed 310
Helix 112	AM4	A	939	945	Right-handed alpha
Helix 113	AM5	A	950	954	Right-handed 310
Helix 114	AM6	A	955	960	Right-handed 310
Helix 115	AM7	A	963	971	Right-handed alpha
Helix 116	AM8	A	973	991	Right-handed alpha
Helix 117	AM9	A	995	1002	Right-handed alpha
Helix 118	AN1	C	69	78	Right-handed alpha
Helix 119	AN2	E	9	22	Right-handed alpha
Helix 120	AN3	E	23	40	Right-handed alpha
Helix 121	AN4	E	51	55	Right-handed 310
Helix 122	AN5	E	59	71	Right-handed alpha
Helix 123	AN6	E	80	95	Right-handed alpha
Helix 124	AN7	E	97	109	Right-handed alpha
Helix 125	AN8	E	115	124	Right-handed alpha
Helix 126	AN9	E	136	146	Right-handed alpha
Helix 127	AO1	E	154	158	Right-handed 310
Helix 128	AO2	E	186	192	Right-handed alpha
Helix 129	AO3	E	192	197	Right-handed alpha
Helix 130	AO4	E	197	210	Right-handed alpha
Helix 131	AO5	E	222	233	Right-handed alpha
Helix 132	AO6	E	254	263	Right-handed alpha
Helix 133	AO7	E	282	298	Right-handed alpha
Helix 134	AO8	E	304	309	Right-handed alpha
Helix 135	AO9	E	312	317	Right-handed alpha
Helix 136	AP1	E	318	321	Right-handed 310
Helix 137	AP2	E	329	334	Right-handed alpha
Helix 138	AP3	E	356	364	Right-handed alpha
Helix 139	AP4	E	367	372	Right-handed alpha
Helix 140	AP5	E	374	391	Right-handed alpha
Helix 141	AP6	E	417	427	Right-handed alpha
Helix 142	AP7	E	432	446	Right-handed alpha
Helix 143	AP8	E	447	464	Right-handed alpha
Helix 144	AP9	E	467	493	Right-handed alpha
Helix 145	AQ1	E	494	500	Right-handed alpha
Helix 146	AQ2	E	508	520	Right-handed alpha
Helix 147	AQ3	E	526	531	Right-handed alpha
Helix 148	AQ4	E	532	539	Right-handed alpha
Helix 149	AQ5	E	542	547	Right-handed alpha
Helix 150	AQ6	E	554	563	Right-handed alpha
Helix 151	AQ7	E	579	598	Right-handed alpha
Helix 152	AQ8	E	600	604	Right-handed 310
Helix 153	AQ9	E	605	629	Right-handed alpha
Helix 154	AR1	E	648	659	Right-handed alpha
Helix 155	AR2	E	660	671	Right-handed alpha
Helix 156	AR3	E	682	700	Right-handed alpha
Helix 157	AR4	E	705	722	Right-handed alpha
Helix 158	AR5	E	723	726	Right-handed 310
Helix 159	AR6	E	729	742	Right-handed alpha
Helix 160	AR7	E	750	761	Right-handed alpha
Helix 161	AR8	E	770	786	Right-handed alpha
Helix 162	AR9	E	800	808	Right-handed alpha
Helix 163	AS1	E	817	826	Right-handed alpha
Helix 164	AS2	E	831	841	Right-handed alpha
Helix 165	AS3	E	842	845	Right-handed 310
Helix 166	AS4	E	846	855	Right-handed alpha
Helix 167	AS5	E	861	872	Right-handed alpha
Helix 168	AS6	E	878	901	Right-handed alpha
Helix 169	AS7	E	911	922	Right-handed alpha
Helix 170	AS8	E	928	933	Right-handed 310
Helix 171	AS9	E	937	945	Right-handed alpha
Helix 172	AT1	E	955	962	Right-handed 310
Helix 173	AT2	E	963	973	Right-handed alpha
Helix 174	AT3	E	975	991	Right-handed alpha
Helix 175	AT4	E	993	1002	Right-handed alpha
Helix 176	AT5	D	7	21	Right-handed alpha
Helix 177	AT6	D	24	39	Right-handed alpha
Helix 178	AT7	D	50	55	Right-handed 310
Helix 179	AT8	D	59	71	Right-handed alpha
Helix 180	AT9	D	82	95	Right-handed alpha
Helix 181	AU1	D	99	109	Right-handed alpha
Helix 182	AU2	D	115	122	Right-handed alpha
Helix 183	AU3	D	136	144	Right-handed alpha
Helix 184	AU4	D	154	158	Right-handed 310
Helix 185	AU5	D	179	183	Right-handed 310
Helix 186	AU6	D	187	192	Right-handed alpha
Helix 187	AU7	D	197	211	Right-handed alpha
Helix 188	AU8	D	222	234	Right-handed alpha
Helix 189	AU9	D	254	263	Right-handed alpha
Helix 190	AV1	D	281	297	Right-handed alpha
Helix 191	AV2	D	304	317	Right-handed alpha
Helix 192	AV3	D	329	334	Right-handed alpha
Helix 193	AV4	D	355	366	Right-handed alpha
Helix 194	AV5	D	366	372	Right-handed alpha
Helix 195	AV6	D	374	391	Right-handed alpha
Helix 196	AV7	D	417	427	Right-handed alpha
Helix 197	AV8	D	431	445	Right-handed alpha
Helix 198	AV9	D	447	462	Right-handed alpha
Helix 199	AW1	D	468	490	Right-handed alpha
Helix 200	AW2	D	508	519	Right-handed alpha
Helix 201	AW3	D	523	531	Right-handed alpha
Helix 202	AW4	D	534	539	Right-handed alpha
Helix 203	AW5	D	551	571	Right-handed alpha
Helix 204	AW6	D	581	598	Right-handed alpha
Helix 205	AW7	D	600	604	Right-handed 310
Helix 206	AW8	D	605	627	Right-handed alpha
Helix 207	AW9	D	634	638	Right-handed 310
Helix 208	AX1	D	648	655	Right-handed alpha
Helix 209	AX2	D	660	672	Right-handed alpha
Helix 210	AX3	D	673	676	Right-handed 310
Helix 211	AX4	D	680	701	Right-handed alpha
Helix 212	AX5	D	705	722	Right-handed alpha
Helix 213	AX6	D	729	742	Right-handed alpha
Helix 214	AX7	D	750	764	Right-handed alpha
Helix 215	AX8	D	768	786	Right-handed alpha
Helix 216	AX9	D	800	812	Right-handed alpha
Helix 217	AY1	D	817	826	Right-handed alpha
Helix 218	AY2	D	831	841	Right-handed alpha
Helix 219	AY3	D	842	845	Right-handed 310
Helix 220	AY4	D	846	855	Right-handed alpha
Helix 221	AY5	D	862	871	Right-handed alpha
Helix 222	AY6	D	878	903	Right-handed alpha
Helix 223	AY7	D	912	922	Right-handed alpha
Helix 224	AY8	D	929	934	Right-handed 310
Helix 225	AY9	D	937	945	Right-handed alpha
Helix 226	AZ1	D	950	954	Right-handed 310
Helix 227	AZ2	D	957	961	Right-handed 310
Helix 228	AZ3	D	963	973	Right-handed alpha
Helix 229	AZ4	D	973	980	Right-handed alpha
Helix 230	AZ5	D	983	991	Right-handed alpha
Helix 231	AZ6	D	993	1005	Right-handed alpha
Helix 232	AZ7	F	47	51	Right-handed 310
Helix 233	AZ8	F	69	78	Right-handed alpha

There are 18 sheets in PDB entry 8ZC9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	150	152	first strand
Strand 2	B	166	169	parallel
Strand 3	B	128	131	parallel
Strand 4	B	42	46	parallel
Strand 5	B	212	216	parallel
Strand 6	B	244	247	parallel
Strand 7	B	267	270	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	338	340	first strand
Strand 2	B	346	348	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	905	908	first strand
Strand 2	C	230	234	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	150	152	first strand
Strand 2	A	166	169	parallel
Strand 3	A	128	131	parallel
Strand 4	A	42	46	parallel
Strand 5	A	212	216	parallel
Strand 6	A	244	247	parallel
Strand 7	A	267	270	parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	338	340	first strand
Strand 2	A	345	348	anti-parallel
Strand 3	A	395	396	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	403	407	first strand
Strand 2	C	2	6	anti-parallel

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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	573	575	first strand
Strand 2	C	29	35	anti-parallel
Strand 3	C	56	64	anti-parallel
Strand 4	C	217	222	anti-parallel
Strand 5	C	194	201	anti-parallel
Strand 6	C	171	175	anti-parallel
Strand 7	C	11	15	anti-parallel
Strand 8	C	21	25	anti-parallel
Strand 9	C	67	68	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	128	131	first strand
Strand 2	E	42	46	parallel
Strand 3	E	212	214	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	150	152	first strand
Strand 2	E	166	168	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	244	247	first strand
Strand 2	E	267	270	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	339	340	first strand
Strand 2	E	346	347	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	646	647	first strand
Strand 2	E	677	678	parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	42	44	first strand
Strand 2	D	212	215	parallel
Strand 3	D	244	247	parallel
Strand 4	D	267	270	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	150	152	first strand
Strand 2	D	166	168	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	345	346	first strand
Strand 2	D	395	396	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	403	406	first strand
Strand 2	F	3	6	anti-parallel

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There are 9 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	573	575	first strand
Strand 2	F	29	35	anti-parallel
Strand 3	F	56	64	anti-parallel
Strand 4	F	217	222	anti-parallel
Strand 5	F	191	201	anti-parallel
Strand 6	F	171	175	anti-parallel
Strand 7	F	10	15	anti-parallel
Strand 8	F	21	26	anti-parallel
Strand 9	F	67	68	anti-parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	573	575	first strand
Strand 2	F	29	35	anti-parallel
Strand 3	F	56	64	anti-parallel
Strand 4	F	217	222	anti-parallel
Strand 5	F	191	201	anti-parallel
Strand 6	F	233	236	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8ZC9

Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZC9