Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZCR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZCR entry

There are 2 chains in PDB entry 8ZCR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 4ALA 340
B
 SER 347PRO 378
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 8ZCR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 23Right-handed alpha
Helix 2
AA2
A
31 44Right-handed alpha
Helix 3
AA3
A
47 58Right-handed alpha
Helix 4
AA4
A
62 74Right-handed alpha
Helix 5
AA5
A
101 113Right-handed alpha
Helix 6
AA6
A
124 140Right-handed alpha
Helix 7
AA7
A
176 180Right-handed 310
Helix 8
AA8
A
222 224Right-handed 310
Helix 9
AA9
A
238 246Right-handed alpha
Helix 10
AB1
A
247 255Right-handed alpha
Helix 11
AB2
A
280 287Right-handed alpha
Helix 12
AB3
A
290 294Right-handed 310
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There are 3 sheets in PDB entry 8ZCR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 30first strand
Strand 2
B
368 375anti-parallel
Strand 3
B
357 363anti-parallel
Strand 4
A
226 233anti-parallel
Strand 5
A
214 220anti-parallel
Strand 6
A
192 209anti-parallel
Strand 7
A
181 186anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 30first strand
Strand 2
B
368 375anti-parallel
Strand 3
B
357 363anti-parallel
Strand 4
A
226 233anti-parallel
Strand 5
A
214 220anti-parallel
Strand 6
A
192 209anti-parallel
Strand 7
A
261 270anti-parallel
Strand 8
B
350 352parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 119first strand
Strand 2
A
85 95parallel
Strand 3
A
157 170anti-parallel
Strand 4
A
326 339anti-parallel
Strand 5
A
309 322anti-parallel
Strand 6
A
272 279anti-parallel
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